Assembly
ASM6720v1
BioProject PRJNA28135 · BioSample SAMEA3138272
GENOME-RESOLVED EVIDENCE
GCA_000067205.1
Bordetella petrii · Complete Genome
View versioned NCBI assembly →
Quality metadata
Genome size 5287950 bp · GC 65.500%
Completeness —% · contamination —%
Pathway marker completeness
| Module | Markers | Fraction | Call |
|---|---|---|---|
| bcd_etf_module | 0/3 | 0.000 | Partial/absent |
| ethanol_entry_support | 0/1 | 0.000 | Partial/absent |
| fatty_acid_biosynthesis_core | 6/8 | 0.750 | Partial/absent |
| lactate_entry_support | 0/2 | 0.000 | Partial/absent |
| reverse_beta_oxidation_core | 2/4 | 0.500 | Partial/absent |
| rnf_complex | 0/6 | 0.000 | Partial/absent |
Detected markers
| Marker | Function | Copies |
|---|
Profile-HMM marker predictions
Approved candidates and review records are genomic predictions, not evidence of expression or MCFA production. Excluded matches remain visible for audit.
| Marker / protein | Confidence | Review status | Score / coverage | Supporting evidence |
|---|---|---|---|---|
| accAWP_012250348.1 · acetyl-CoA carboxylase carboxyltransferase subunit alpha | High | Approved candidatestrong profile and bridge orthogroup support | 351.400 / 0.98900 | Bridge orthogroup OG0001120 |
| accBWP_012247596.1 · acetyl-CoA carboxylase biotin carboxyl carrier protein | Medium | Approved candidatestrong profile plus independent annotation support: gene_symbol | 135.400 / 0.98100 | Annotation: gene_symbol |
| accCWP_012247597.1 · acetyl-CoA carboxylase biotin carboxylase subunit | Medium | Approved candidatestrong profile plus independent annotation support: gene_symbol | 584.100 / 0.99600 | Annotation: gene_symbol |
| accDWP_012248662.1 · acetyl-CoA carboxylase, carboxyltransferase subunit beta | High | Approved candidatestrong profile and bridge orthogroup support; annotation support: gene_symbol | 321.100 / 0.89400 | Bridge orthogroup OG0000844 |
| coatWP_012248168.1 · CoA transferase subunit B | Medium | Approved candidatestrong profile plus independent annotation support: specific_product_name | 213.600 / 0.94000 | Annotation: specific_product_name |
| coatWP_012248712.1 · CoA transferase subunit B | Medium | Approved candidatestrong profile plus independent annotation support: specific_product_name | 211.600 / 0.94000 | Annotation: specific_product_name |
| coatWP_012251069.1 · 3-oxoacid CoA-transferase subunit B | Medium | Approved candidatestrong profile plus independent annotation support: specific_product_name | 200.200 / 0.91200 | Annotation: specific_product_name |
| coatWP_012247399.1 · 3-oxoacid CoA-transferase subunit B | Medium | Approved candidatestrong profile plus independent annotation support: specific_product_name | 191.800 / 0.95900 | Annotation: specific_product_name |
| coatWP_012250490.1 · 3-oxoacid CoA-transferase subunit B | Medium | Approved candidatestrong profile plus independent annotation support: specific_product_name | 175.500 / 0.93100 | Annotation: specific_product_name |
| coatWP_012248558.1 · 3-oxoacid CoA-transferase subunit B | Medium | Approved candidatestrong profile plus independent annotation support: specific_product_name | 172.700 / 0.95400 | Annotation: specific_product_name |
| coatWP_012251358.1 · 3-oxoacid CoA-transferase subunit B | Medium | Approved candidatestrong profile plus independent annotation support: specific_product_name | 166.900 / 0.92600 | Annotation: specific_product_name |
| fabFWP_012248679.1 · beta-ketoacyl-ACP synthase II | Medium | Approved candidatestrong profile plus independent annotation support: gene_symbol | 639.600 / 0.99000 | Annotation: gene_symbol |
| fabGWP_041862821.1 · 3-oxoacyl-ACP reductase FabG | High | Approved candidatestrong profile and bridge orthogroup support; annotation support: gene_symbol | 240.600 / 0.98800 | Bridge orthogroup OG0000008 |
| fabGWP_012251269.1 · 3-oxoacyl-ACP reductase FabG | High | Approved candidatestrong profile and bridge orthogroup support; annotation support: gene_symbol | 176.900 / 0.96800 | Bridge orthogroup OG0000008 |
| fabIWP_012247648.1 · enoyl-ACP reductase FabI | Medium | Approved candidatestrong profile plus independent annotation support: gene_symbol | 385.300 / 0.98100 | Annotation: gene_symbol |
| fabZWP_012249433.1 · 3-hydroxyacyl-ACP dehydratase FabZ | High | Approved candidatestrong profile and bridge orthogroup support; annotation support: gene_symbol | 121.800 / 0.76000 | Bridge orthogroup OG0000074 |
| hbdWP_012251353.1 · 3-hydroxyacyl-CoA dehydrogenase family protein | High | Approved candidatestrong profile and bridge orthogroup support | 272.700 / 0.98600 | Bridge orthogroup OG0000153 |
| thlWP_012250188.1 · beta-ketothiolase BktB | High | Approved candidatestrong profile and bridge orthogroup support | 487.400 / 0.99700 | Bridge orthogroup OG0000010 |
| thlWP_012249103.1 · thiolase family protein | High | Approved candidatestrong profile and bridge orthogroup support | 459.000 / 0.99000 | Bridge orthogroup OG0000010 |
| thlWP_012247086.1 · acetyl-CoA C-acetyltransferase | High | Approved candidatestrong profile and bridge orthogroup support | 447.600 / 0.98700 | Bridge orthogroup OG0000010 |
| thlWP_012249574.1 · 3-oxoadipyl-CoA thiolase | High | Approved candidatestrong profile and bridge orthogroup support | 411.500 / 0.99000 | Bridge orthogroup OG0000010 |
| thlWP_012250313.1 · acetyl-CoA C-acyltransferase | High | Approved candidatestrong profile and bridge orthogroup support | 383.700 / 0.99200 | Bridge orthogroup OG0000010 |
| thlWP_012249100.1 · thiolase family protein | High | Approved candidatestrong profile and bridge orthogroup support | 378.500 / 0.99200 | Bridge orthogroup OG0000010 |
| thlWP_012249870.1 · acetyl-CoA C-acyltransferase | High | Approved candidatestrong profile and bridge orthogroup support | 342.300 / 0.99500 | Bridge orthogroup OG0000010 |
| thlWP_012250309.1 · acetyl-CoA C-acetyltransferase | High | Approved candidatestrong profile and bridge orthogroup support | 308.600 / 0.99000 | Bridge orthogroup OG0000010 |
| crtWP_012249869.1 · 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | Low | Excluded: low confidenceprofile hit lacks strong score and bridge orthogroup support | 125.800 / 0.67200 | Profile only |
| fabGWP_012249205.1 · SDR family NAD(P)-dependent oxidoreductase | Low | Excluded: low confidenceprofile hit lacks strong score and bridge orthogroup support | 91.900 / 0.74200 | Profile only |
| fabGWP_012249675.1 · SDR family oxidoreductase | Low | Excluded: low confidenceprofile hit lacks strong score and bridge orthogroup support | 86.400 / 0.78600 | Profile only |
| accCWP_041862584.1 · acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 521.100 / 0.99100 | Profile only |
| accCWP_012248148.1 · acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 479.900 / 0.99300 | Profile only |
| accCWP_012247318.1 · urea carboxylase | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 436.600 / 0.98700 | Profile only |
| bcdWP_041863569.1 · acyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 391.100 / 0.98400 | Profile only |
| bcdWP_012247389.1 · acyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 379.800 / 0.98200 | Profile only |
| bcdWP_012249420.1 · acyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 373.500 / 0.99700 | Profile only |
| bcdWP_012247865.1 · acyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 366.800 / 0.99700 | Profile only |
| bcdWP_012247088.1 · isovaleryl-CoA dehydrogenase | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 366.700 / 0.99500 | Profile only |
| bcdWP_012247290.1 · acyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 341.000 / 0.96800 | Profile only |
| bcdWP_012248231.1 · acyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 337.400 / 0.98700 | Profile only |
| bcdWP_012250676.1 · acyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 321.300 / 0.99700 | Profile only |
| bcdWP_012247575.1 · acyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 299.200 / 0.83400 | Profile only |
| bcdWP_231852659.1 · acyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 283.700 / 0.99500 | Profile only |
| bcdWP_012248854.1 · acyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 274.300 / 0.92100 | Profile only |
| bcdWP_012250465.1 · acyl-CoA dehydrogenase | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 260.400 / 0.98200 | Profile only |
| bcdWP_012249181.1 · acyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 259.600 / 0.93900 | Profile only |
| crtWP_012247358.1 · enoyl-CoA hydratase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 270.400 / 0.97700 | Annotation: specific_product_name |
| crtWP_012248229.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 211.600 / 0.97300 | Annotation: specific_product_name |
| crtWP_012248115.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 211.500 / 0.99600 | Annotation: specific_product_name |
| crtWP_012247799.1 · crotonase/enoyl-CoA hydratase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 199.900 / 0.98100 | Annotation: specific_product_name |
| crtWP_012250189.1 · crotonase/enoyl-CoA hydratase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 190.000 / 0.94200 | Annotation: specific_product_name |
| crtWP_012250335.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 187.500 / 0.90000 | Annotation: specific_product_name |
| crtWP_012251545.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 180.000 / 0.96900 | Annotation: specific_product_name |
| crtWP_012248153.1 · enoyl-CoA hydratase-related protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 179.400 / 0.90300 | Annotation: specific_product_name |
| crtWP_012251185.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 173.200 / 0.98500 | Annotation: specific_product_name |
| crtWP_012247396.1 · enoyl-CoA hydratase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 172.200 / 0.98100 | Annotation: specific_product_name |
| crtWP_012250788.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 167.900 / 0.95800 | Annotation: specific_product_name |
| crtWP_012247492.1 · enoyl-CoA hydratase-related protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 166.600 / 0.93400 | Annotation: specific_product_name |
| crtWP_012250331.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 160.900 / 0.86500 | Annotation: specific_product_name |
| crtWP_012249473.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 160.000 / 0.94600 | Annotation: specific_product_name |
| crtWP_012248211.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 158.600 / 0.96100 | Annotation: specific_product_name |
| crtWP_012248851.1 · 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 158.100 / 0.99600 | Profile only |
| crtWP_012247831.1 · 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 158.000 / 0.99200 | Profile only |
| crtWP_012248201.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 153.000 / 0.97300 | Annotation: specific_product_name |
| crtWP_012250186.1 · enoyl-CoA hydratase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 152.300 / 0.84900 | Annotation: specific_product_name |
| crtWP_012247574.1 · enoyl-CoA hydratase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 152.000 / 0.96100 | Annotation: specific_product_name |
| crtWP_012247386.1 · enoyl-CoA hydratase-related protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 148.400 / 0.94600 | Annotation: specific_product_name |
| crtWP_012251049.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 146.200 / 0.96100 | Annotation: specific_product_name |
| crtWP_041862737.1 · enoyl-CoA hydratase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 145.100 / 0.96500 | Annotation: specific_product_name |
| crtWP_012248220.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 144.800 / 0.96900 | Annotation: specific_product_name |
| crtWP_012247293.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 144.200 / 0.95400 | Annotation: specific_product_name |
| crtWP_012247059.1 · enoyl-CoA hydratase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 135.900 / 0.93800 | Annotation: specific_product_name |
| crtWP_012248236.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 135.900 / 0.95000 | Annotation: specific_product_name |
| crtWP_012248165.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 134.800 / 0.94600 | Annotation: specific_product_name |
| crtWP_012248152.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 130.400 / 0.96900 | Annotation: specific_product_name |
| crtWP_012250177.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 122.500 / 0.97300 | Annotation: specific_product_name |
| crtWP_012247385.1 · enoyl-CoA hydratase/isomerase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 120.700 / 0.90700 | Annotation: specific_product_name |
| etfAWP_041862838.1 · electron transfer flavoprotein subunit alpha/FixB family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 240.700 / 0.94600 | Profile only |
| etfAWP_012250683.1 · electron transfer flavoprotein subunit alpha/FixB family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 222.500 / 0.95200 | Profile only |
| fabGWP_012250677.1 · SDR family NAD(P)-dependent oxidoreductase | High | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 234.700 / 0.99200 | Bridge orthogroup OG0000008 |
| fabGWP_012247411.1 · glucose 1-dehydrogenase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 211.600 / 0.98400 | Profile only |
| fabGWP_012248772.1 · acetoacetyl-CoA reductase | High | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 210.600 / 0.98000 | Bridge orthogroup OG0000008 |
| fabGWP_012248440.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 205.100 / 0.99200 | Profile only |
| fabGWP_012248128.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 201.700 / 0.98000 | Profile only |
| fabGWP_012247754.1 · 3-oxoacyl-ACP reductase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 201.700 / 0.98800 | Annotation: specific_product_name |
| fabGWP_012247075.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 198.800 / 0.99200 | Profile only |
| fabGWP_012247340.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 193.300 / 0.97200 | Profile only |
| fabGWP_012247573.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 190.600 / 0.98400 | Profile only |
| fabGWP_012249258.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 182.400 / 0.98800 | Profile only |
| fabGWP_012250561.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 181.500 / 0.96000 | Profile only |
| fabGWP_012247062.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 179.800 / 0.98000 | Profile only |
| fabGWP_041864349.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 177.300 / 0.98800 | Profile only |
| fabGWP_012248523.1 · 3-hydroxybutyrate dehydrogenase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 176.400 / 0.98800 | Profile only |
| fabGWP_041863177.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 172.700 / 0.96800 | Profile only |
| fabGWP_012250065.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 172.000 / 0.97200 | Profile only |
| fabGWP_012247747.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 170.200 / 0.98800 | Profile only |
| fabGWP_012247882.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 169.500 / 0.96400 | Profile only |
| fabGWP_012247902.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 168.500 / 0.98400 | Profile only |
| fabGWP_050978214.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 165.300 / 0.98000 | Profile only |
| fabGWP_012248575.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 164.900 / 0.99200 | Profile only |
| fabGWP_012248274.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 162.500 / 0.96400 | Profile only |
| fabGWP_231852658.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 159.800 / 0.95600 | Profile only |
| fabGWP_012251202.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 159.300 / 0.96800 | Profile only |
| fabGWP_041864386.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 158.300 / 0.98400 | Profile only |
| fabGWP_012251355.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 158.100 / 0.97200 | Profile only |
| fabGWP_012250807.1 · SDR family NAD(P)-dependent oxidoreductase | High | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 156.900 / 0.78600 | Bridge orthogroup OG0000008 |
| fabGWP_012251725.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 156.800 / 0.79400 | Profile only |
| fabGWP_012248158.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 153.600 / 0.99200 | Profile only |
| fabGWP_012249919.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 152.000 / 0.96800 | Profile only |
| fabGWP_012248570.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 151.100 / 0.98000 | Profile only |
| fabGWP_012249160.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 149.400 / 0.77400 | Profile only |
| fabGWP_012248119.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 146.700 / 0.98400 | Profile only |
| fabGWP_012247397.1 · SDR family oxidoreductase | High | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 145.700 / 0.97600 | Bridge orthogroup OG0000008 |
| fabGWP_012250800.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 141.600 / 0.95200 | Profile only |
| fabGWP_041862897.1 · 3-hydroxyacyl-CoA dehydrogenase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 140.400 / 0.98800 | Profile only |
| fabGWP_012248380.1 · benzoate diol dehydrogenase BenD | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 138.200 / 0.98400 | Profile only |
| fabGWP_012250386.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 133.700 / 0.96400 | Profile only |
| fabGWP_012249294.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 132.500 / 0.93500 | Profile only |
| fabGWP_012250592.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 132.300 / 0.97200 | Profile only |
| fabGWP_231852660.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 129.600 / 0.89900 | Profile only |
| fabGWP_012250834.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 129.600 / 0.97600 | Profile only |
| fabGWP_012247817.1 · SDR family NAD(P)-dependent oxidoreductase | High | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 126.600 / 0.98000 | Bridge orthogroup OG0000008 |
| fabGWP_012250639.1 · cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 121.400 / 0.98800 | Profile only |
| fabGWP_012249269.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 116.700 / 0.80200 | Profile only |
| fabGWP_012248883.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 116.400 / 0.98000 | Profile only |
| fabGWP_041864134.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 109.900 / 0.75400 | Profile only |
| fabGWP_012249746.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 105.900 / 0.99200 | Profile only |
| fabGWP_012251056.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 100.600 / 0.97600 | Profile only |
| fabHWP_012248675.1 · beta-ketoacyl-ACP synthase III | Medium | Needs reviewno bridge-supported orthogroup; require domain, motif, or neighborhood confirmation | 269.500 / 0.98800 | Profile only |
| fabKWP_012250328.1 · NAD(P)H-dependent flavin oxidoreductase | Medium | Needs reviewno bridge-supported orthogroup; require domain, motif, or neighborhood confirmation | 356.100 / 0.98400 | Profile only |
| fabKWP_012248205.1 · NAD(P)H-dependent flavin oxidoreductase | Medium | Needs reviewno bridge-supported orthogroup; require domain, motif, or neighborhood confirmation | 325.300 / 0.98700 | Profile only |
| fabKWP_151208931.1 · NAD(P)H-dependent flavin oxidoreductase | Medium | Needs reviewno bridge-supported orthogroup; require domain, motif, or neighborhood confirmation | 308.700 / 0.97500 | Profile only |
| fabKWP_012250720.1 · NAD(P)H-dependent flavin oxidoreductase | Medium | Needs reviewno bridge-supported orthogroup; require domain, motif, or neighborhood confirmation | 235.800 / 0.96500 | Profile only |
| fabKWP_012248129.1 · NAD(P)H-dependent flavin oxidoreductase | Medium | Needs reviewno bridge-supported orthogroup; require domain, motif, or neighborhood confirmation | 174.400 / 0.92700 | Profile only |
| fabLWP_012247754.1 · 3-oxoacyl-ACP reductase family protein | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 225.300 / 0.98000 | Profile only |
| fabLWP_012250561.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 220.100 / 0.96400 | Profile only |
| fabLWP_012247411.1 · glucose 1-dehydrogenase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 213.300 / 0.98000 | Profile only |
| fabLWP_012250386.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 212.100 / 0.97200 | Profile only |
| fabLWP_012247340.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 203.300 / 0.96400 | Profile only |
| fabLWP_012250677.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 203.300 / 0.97200 | Profile only |
| fabLWP_012249746.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 202.100 / 0.98400 | Profile only |
| fabLWP_012249258.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 197.300 / 0.97600 | Profile only |
| fabLWP_041864349.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 188.000 / 0.98800 | Profile only |
| fabLWP_012247062.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 187.000 / 0.98400 | Profile only |
| fabLWP_041862821.1 · 3-oxoacyl-ACP reductase FabG | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 186.900 / 0.98000 | Profile only |
| fabLWP_012247075.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 186.700 / 0.97200 | Profile only |
| fabLWP_012248128.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 184.300 / 0.99200 | Profile only |
| fabLWP_012248440.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 184.100 / 0.99200 | Profile only |
| fabLWP_012251269.1 · 3-oxoacyl-ACP reductase FabG | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 182.500 / 0.97600 | Profile only |
| fabLWP_050978214.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 181.700 / 0.97200 | Profile only |
| fabLWP_231852658.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 179.900 / 0.95600 | Profile only |
| fabLWP_012247747.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 179.500 / 0.99200 | Profile only |
| fabLWP_012248575.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 177.100 / 0.99200 | Profile only |
| fabLWP_012247573.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 176.800 / 0.97600 | Profile only |
| fabLWP_012247902.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 175.300 / 0.98400 | Profile only |
| fabLWP_012248570.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 174.000 / 0.97600 | Profile only |
| fabLWP_012248158.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 164.500 / 0.99200 | Profile only |
| fabLWP_012248523.1 · 3-hydroxybutyrate dehydrogenase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 163.300 / 0.97600 | Profile only |
| fabLWP_012247882.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 162.700 / 0.96800 | Profile only |
| fabLWP_041864386.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 160.500 / 0.98400 | Profile only |
| fabLWP_012250065.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 156.200 / 0.98000 | Profile only |
| fabLWP_041863177.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 155.600 / 0.98800 | Profile only |
| fabLWP_012249919.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 152.400 / 0.98800 | Profile only |
| fabLWP_012248772.1 · acetoacetyl-CoA reductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 150.800 / 0.97600 | Profile only |
| fabLWP_012248274.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 144.000 / 0.96800 | Profile only |
| fabLWP_012250592.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 142.700 / 0.98800 | Profile only |
| fabLWP_012249294.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 141.600 / 0.92100 | Profile only |
| fabLWP_012250800.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 141.200 / 0.95200 | Profile only |
| fabLWP_012249160.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 140.900 / 0.88900 | Profile only |
| fabLWP_012251202.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 138.100 / 0.96400 | Profile only |
| fabLWP_012251725.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 137.300 / 0.77400 | Profile only |
| fabLWP_012247397.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 137.000 / 0.98400 | Profile only |
| fabLWP_012248883.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 134.000 / 0.97200 | Profile only |
| fabLWP_231852660.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 132.600 / 0.91300 | Profile only |
| fabLWP_012250807.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 127.400 / 0.78200 | Profile only |
| fabLWP_012250834.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 125.600 / 0.97200 | Profile only |
| fabLWP_012248380.1 · benzoate diol dehydrogenase BenD | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 125.600 / 0.98400 | Profile only |
| fabLWP_012251355.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 124.700 / 0.97600 | Profile only |
| fabLWP_012251056.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 115.600 / 0.97200 | Profile only |
| fabLWP_012247817.1 · SDR family NAD(P)-dependent oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 114.200 / 0.96800 | Profile only |
| fabLWP_012249269.1 · SDR family oxidoreductase | Medium | Needs reviewextreme per-proteome copy number; profile alone is not function-specific | 114.100 / 0.78600 | Profile only |
| hbdWP_012248232.1 · 3-hydroxyacyl-CoA dehydrogenase family protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 276.000 / 0.98600 | Profile only |
| hbdWP_012247391.1 · 3-hydroxyacyl-CoA dehydrogenase | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 262.100 / 0.98600 | Profile only |
| hbdWP_012249869.1 · 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 216.200 / 0.98200 | Profile only |
| thlWP_012251070.1 · acetyl-CoA C-acetyltransferase | Medium | Needs reviewretain confidence tier and orthogroup-support fields during import | 505.300 / 0.99200 | Profile only |
Protein-level evidence
| Gene | Protein | Orthogroup | Coordinates | Annotation |
|---|
These are genomic annotation predictions. Experimental activity, expression and metabolite production require separate evidence.