Browse GEMs
Search by organism, assembly, or model ID. Filter native, gap-filled, and curated variants, inspect validation evidence, then send a selected model to the workspace.
Open model catalog →Genome-scale metabolic modeling
Explore models. Configure a medium. Launch an analysis.
A BLAST-style computational workspace for assembly-specific GEMs. Browse evidence-qualified models, select a versioned medium, submit FBA, and track the assigned job ID.
65Available GEMs
25Native models
10Versioned media
0Optimizer eligible
Research computation status
No model has yet passed global optimizer qualification; compatible research-grade FBA submissions remain available. Output is predicted steady-state model flux, not a measured concentration, yield, or titer.
No model has yet passed global optimizer qualification; compatible research-grade FBA submissions remain available. Output is predicted steady-state model flux, not a measured concentration, yield, or titer.
Interactive workspace
Choose one non-quarantined GEM and one versioned medium. Each unique request receives a UUID and runs asynchronously in the isolated worker.
Configure analysis →Recent workspace jobs
Compact status only. Detailed precomputed simulation results are kept off this page.
No jobs have been submitted yet. Start by browsing a GEM or opening the interactive workspace.
Looking for archived batch studies? Open the precomputed simulation archive.