Assembly
ASM28349v2
BioProject PRJEA70535 · BioSample SAMEA2272734
GENOME-RESOLVED EVIDENCE
GCA_000283495.2
Megasphaera elsdenii · Chromosome
View versioned NCBI assembly →
Quality metadata
Genome size 2474718 bp · GC 53.000%
Completeness —% · contamination —%
Pathway marker completeness
| Module | Markers | Fraction | Call |
|---|
Detected markers
| Marker | Function | Copies |
|---|
Profile-HMM marker predictions
Approved candidates and review records are genomic predictions, not evidence of expression or MCFA production. Excluded matches remain visible for audit.
| Marker / protein | Confidence | Review status | Score / coverage | Supporting evidence |
|---|---|---|---|---|
| No profile-HMM predictions for this assembly. | ||||
Protein-level evidence
| Gene | Protein | Orthogroup | Coordinates | Annotation |
|---|---|---|---|---|
| bcdMELS_0461 | CCC72684.1 | Unmapped | :None–None | butyryl-CoA dehydrogenase |
| crtMELS_0462 | CCC72685.1 | Unmapped | :None–None | 3-hydroxybutyryl-CoA dehydratase |
| bcdMELS_0747 | CCC72969.1 | Unmapped | :None–None | butyryl-CoA dehydrogenase |
| ldhMELS_1294 | CCC73515.1 | Unmapped | :None–None | L-lactate dehydrogenase |
| hbdMELS_1448 | CCC73669.1 | Unmapped | :None–None | 3-hydroxybutyryl-CoA dehydrogenase |
| crtMELS_1449 | CCC73670.1 | Unmapped | :None–None | 3-hydroxybutyryl-CoA dehydratase |
These are genomic annotation predictions. Experimental activity, expression and metabolite production require separate evidence.