Assembly
ASM2665094v1
BioProject PRJNA735695 · BioSample SAMN22045405
GENOME-RESOLVED EVIDENCE
GCA_026650945.1
Clostridium tagluense · Complete Genome
View versioned NCBI assembly →
Quality metadata
Genome size 5450588 bp · GC 31.000%
Completeness 98.760% · contamination 2.170%
Pathway marker completeness
| Module | Markers | Fraction | Call |
|---|---|---|---|
| bcd_etf_module | 0/3 | 0.000 | Partial/absent |
| ethanol_entry_support | 1/1 | 1.000 | Complete marker set |
| fatty_acid_biosynthesis_core | 3/8 | 0.375 | Partial/absent |
| lactate_entry_support | 0/2 | 0.000 | Partial/absent |
| reverse_beta_oxidation_core | 3/4 | 0.750 | Partial/absent |
| rnf_complex | 0/6 | 0.000 | Partial/absent |
Detected markers
| Marker | Function | Copies |
|---|---|---|
| adhE | bifunctional acetaldehyde-CoA/alcohol dehydrogenase | 1 |
| accB | acetyl-CoA carboxylase biotin carboxyl carrier protein | 1 |
| accC | acetyl-CoA carboxylase biotin carboxylase | 1 |
| fabZ | 3-hydroxyacyl-ACP dehydratase | 1 |
| crt | crotonase/enoyl-CoA hydratase | 1 |
| hbd | 3-hydroxybutyryl-CoA dehydrogenase | 1 |
| thl | acetyl-CoA acetyltransferase/thiolase | 1 |
Profile-HMM marker predictions
Approved candidates and review records are genomic predictions, not evidence of expression or MCFA production. Excluded matches remain visible for audit.
| Marker / protein | Confidence | Review status | Score / coverage | Supporting evidence |
|---|---|---|---|---|
| No profile-HMM predictions for this assembly. | ||||
Protein-level evidence
| Gene | Protein | Orthogroup | Coordinates | Annotation |
|---|---|---|---|---|
| accCLL095_22035 | WAG50494.1 | OG0000061 | CP086155.1:4772615–4773961 - | acetyl-CoA carboxylase biotin carboxylase subunit [Clostridium tagluense] |
| accBLL095_22045 | WAG50496.1 | OG0000212 | CP086155.1:4774510–4775028 - | acetyl-CoA carboxylase biotin carboxyl carrier protein [Clostridium tagluense] |
| hbdLL095_01445 | WAG50965.1 | OG0000229 | CP086155.1:309432–310280 + | 3-hydroxybutyryl-CoA dehydrogenase [Clostridium tagluense] |
| thlLL095_02595 | WAG51168.1 | OG0000234 | CP086155.1:553935–555113 + | acetyl-CoA C-acetyltransferase [Clostridium tagluense] |
| fabZLL095_22040 | WAG50495.1 | OG0000785 | CP086155.1:4773994–4774440 - | 3-hydroxyacyl-ACP dehydratase FabZ [Clostridium tagluense] |
| adhELL095_10525 | WAG52649.1 | OG0001124 | CP086155.1:2259486–2262068 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase [Clostridium tagluense] |
| crtLL095_01425 | WAG50961.1 | OG0001394 | CP086155.1:305494–306273 + | short-chain-enoyl-CoA hydratase [Clostridium tagluense] |
These are genomic annotation predictions. Experimental activity, expression and metabolite production require separate evidence.