GEM record · Native

[Clostridium] saccharolyticum WM1

Lacrimispora saccharolytica · GCF_000144625.1

2343Reactions
1483Metabolites
1119Genes
NoOptimizer eligible

Model identity

Stable IDGCF_000144625.1.native.carveme-1.6.6
Review statusValidation only
ReconstructionCarveMe 1.6.6

Validation evidence

Structured checks and medium-specific model outputs.

TestScenarioValueOutcome
biomass_flux_openopen_exchanges110.41373719965698 model fluxinfo
blocked_fraction_openopen_exchanges0.0076824583866837385 fractioninfo
c4_capacity_openopen_exchanges— mmol/gDW/hinfo
c6_capacity_openopen_exchanges— mmol/gDW/hinfo
c8_capacity_openopen_exchanges— mmol/gDW/hinfo
memote_score—0.8553486133511997 fractioninfo
biomass_fluxfw_carbohydrate_low_v1.0.0— mmol/gDW/hinfo
c4_theoretical_capacityfw_carbohydrate_low_v1.0.0— mmol/gDW/hinfo
c6_theoretical_capacityfw_carbohydrate_low_v1.0.0— mmol/gDW/hinfo
c8_theoretical_capacityfw_carbohydrate_low_v1.0.0— mmol/gDW/hinfo
biomass_fluxfw_carbohydrate_high_v1.0.0— mmol/gDW/hinfo
c4_theoretical_capacityfw_carbohydrate_high_v1.0.0— mmol/gDW/hinfo
c6_theoretical_capacityfw_carbohydrate_high_v1.0.0— mmol/gDW/hinfo
c8_theoretical_capacityfw_carbohydrate_high_v1.0.0— mmol/gDW/hinfo
biomass_fluxfw_protein_low_v1.0.0— mmol/gDW/hinfo
c4_theoretical_capacityfw_protein_low_v1.0.0— mmol/gDW/hinfo
c6_theoretical_capacityfw_protein_low_v1.0.0— mmol/gDW/hinfo
c8_theoretical_capacityfw_protein_low_v1.0.0— mmol/gDW/hinfo
biomass_fluxfw_protein_high_v1.0.0— mmol/gDW/hinfo
c4_theoretical_capacityfw_protein_high_v1.0.0— mmol/gDW/hinfo
c6_theoretical_capacityfw_protein_high_v1.0.0— mmol/gDW/hinfo
c8_theoretical_capacityfw_protein_high_v1.0.0— mmol/gDW/hinfo
biomass_fluxfw_lipid_low_v1.0.0— mmol/gDW/hinfo
c4_theoretical_capacityfw_lipid_low_v1.0.0— mmol/gDW/hinfo
c6_theoretical_capacityfw_lipid_low_v1.0.0— mmol/gDW/hinfo
c8_theoretical_capacityfw_lipid_low_v1.0.0— mmol/gDW/hinfo
biomass_fluxfw_lipid_high_v1.0.0— mmol/gDW/hinfo
c4_theoretical_capacityfw_lipid_high_v1.0.0— mmol/gDW/hinfo
c6_theoretical_capacityfw_lipid_high_v1.0.0— mmol/gDW/hinfo
c8_theoretical_capacityfw_lipid_high_v1.0.0— mmol/gDW/hinfo
biomass_fluxfw_lactate_low_v1.0.0— mmol/gDW/hinfo
c4_theoretical_capacityfw_lactate_low_v1.0.0— mmol/gDW/hinfo
c6_theoretical_capacityfw_lactate_low_v1.0.0— mmol/gDW/hinfo
c8_theoretical_capacityfw_lactate_low_v1.0.0— mmol/gDW/hinfo
biomass_fluxfw_lactate_high_v1.0.0— mmol/gDW/hinfo
c4_theoretical_capacityfw_lactate_high_v1.0.0— mmol/gDW/hinfo
c6_theoretical_capacityfw_lactate_high_v1.0.0— mmol/gDW/hinfo
c8_theoretical_capacityfw_lactate_high_v1.0.0— mmol/gDW/hinfo
biomass_fluxfw_ethanol_acetate_low_v1.0.0— mmol/gDW/hinfo
c4_theoretical_capacityfw_ethanol_acetate_low_v1.0.0— mmol/gDW/hinfo
c6_theoretical_capacityfw_ethanol_acetate_low_v1.0.0— mmol/gDW/hinfo
c8_theoretical_capacityfw_ethanol_acetate_low_v1.0.0— mmol/gDW/hinfo
biomass_fluxfw_ethanol_acetate_high_v1.0.0— mmol/gDW/hinfo
c4_theoretical_capacityfw_ethanol_acetate_high_v1.0.0— mmol/gDW/hinfo
c6_theoretical_capacityfw_ethanol_acetate_high_v1.0.0— mmol/gDW/hinfo
c8_theoretical_capacityfw_ethanol_acetate_high_v1.0.0— mmol/gDW/hinfo