GEM record · Food-waste gap-filled
Clostridium tyrobutyricum
Clostridium tyrobutyricum · GCF_001642655.1
—Reactions
—Metabolites
—Genes
NoOptimizer eligible
Model identity
Stable IDGCF_001642655.1.generic_gapfilled_media_v1.carveme-1.6.6
Review statusValidation only
ReconstructionCarveMe 1.6.6
Validation evidence
Structured checks and medium-specific model outputs.
| Test | Scenario | Value | Outcome |
|---|---|---|---|
| memote_score | — | 0.8587410865223271 fraction | info |
| biomass_flux | fw_carbohydrate_low_v1.0.0 | 0.018343397169073863 mmol/gDW/h | info |
| c4_theoretical_capacity | fw_carbohydrate_low_v1.0.0 | — mmol/gDW/h | info |
| c6_theoretical_capacity | fw_carbohydrate_low_v1.0.0 | — mmol/gDW/h | info |
| c8_theoretical_capacity | fw_carbohydrate_low_v1.0.0 | — mmol/gDW/h | info |
| biomass_flux | fw_carbohydrate_high_v1.0.0 | 0.07337358867629694 mmol/gDW/h | info |
| c4_theoretical_capacity | fw_carbohydrate_high_v1.0.0 | — mmol/gDW/h | info |
| c6_theoretical_capacity | fw_carbohydrate_high_v1.0.0 | — mmol/gDW/h | info |
| c8_theoretical_capacity | fw_carbohydrate_high_v1.0.0 | — mmol/gDW/h | info |
| biomass_flux | fw_protein_low_v1.0.0 | 0.00287078437988895 mmol/gDW/h | info |
| c4_theoretical_capacity | fw_protein_low_v1.0.0 | — mmol/gDW/h | info |
| c6_theoretical_capacity | fw_protein_low_v1.0.0 | — mmol/gDW/h | info |
| c8_theoretical_capacity | fw_protein_low_v1.0.0 | — mmol/gDW/h | info |
| biomass_flux | fw_protein_high_v1.0.0 | 0.01148313751955522 mmol/gDW/h | info |
| c4_theoretical_capacity | fw_protein_high_v1.0.0 | — mmol/gDW/h | info |
| c6_theoretical_capacity | fw_protein_high_v1.0.0 | — mmol/gDW/h | info |
| c8_theoretical_capacity | fw_protein_high_v1.0.0 | — mmol/gDW/h | info |
| biomass_flux | fw_lipid_low_v1.0.0 | 0.00052899261280257 mmol/gDW/h | info |
| c4_theoretical_capacity | fw_lipid_low_v1.0.0 | — mmol/gDW/h | info |
| c6_theoretical_capacity | fw_lipid_low_v1.0.0 | — mmol/gDW/h | info |
| c8_theoretical_capacity | fw_lipid_low_v1.0.0 | — mmol/gDW/h | info |
| biomass_flux | fw_lipid_high_v1.0.0 | 0.002115970451210286 mmol/gDW/h | info |
| c4_theoretical_capacity | fw_lipid_high_v1.0.0 | — mmol/gDW/h | info |
| c6_theoretical_capacity | fw_lipid_high_v1.0.0 | — mmol/gDW/h | info |
| c8_theoretical_capacity | fw_lipid_high_v1.0.0 | — mmol/gDW/h | info |
| biomass_flux | fw_lactate_low_v1.0.0 | 0.07996475341813358 mmol/gDW/h | info |
| c4_theoretical_capacity | fw_lactate_low_v1.0.0 | — mmol/gDW/h | info |
| c6_theoretical_capacity | fw_lactate_low_v1.0.0 | — mmol/gDW/h | info |
| c8_theoretical_capacity | fw_lactate_low_v1.0.0 | — mmol/gDW/h | info |
| biomass_flux | fw_lactate_high_v1.0.0 | 0.31985901367252517 mmol/gDW/h | info |
| c4_theoretical_capacity | fw_lactate_high_v1.0.0 | — mmol/gDW/h | info |
| c6_theoretical_capacity | fw_lactate_high_v1.0.0 | — mmol/gDW/h | info |
| c8_theoretical_capacity | fw_lactate_high_v1.0.0 | — mmol/gDW/h | info |
| biomass_flux | fw_ethanol_acetate_low_v1.0.0 | 0.06792552602547948 mmol/gDW/h | info |
| c4_theoretical_capacity | fw_ethanol_acetate_low_v1.0.0 | — mmol/gDW/h | info |
| c6_theoretical_capacity | fw_ethanol_acetate_low_v1.0.0 | — mmol/gDW/h | info |
| c8_theoretical_capacity | fw_ethanol_acetate_low_v1.0.0 | — mmol/gDW/h | info |
| biomass_flux | fw_ethanol_acetate_high_v1.0.0 | 0.27170210410202683 mmol/gDW/h | info |
| c4_theoretical_capacity | fw_ethanol_acetate_high_v1.0.0 | — mmol/gDW/h | info |
| c6_theoretical_capacity | fw_ethanol_acetate_high_v1.0.0 | — mmol/gDW/h | info |
| c8_theoretical_capacity | fw_ethanol_acetate_high_v1.0.0 | — mmol/gDW/h | info |