BioChainDbA Comparative Genomics Resource for Microbial Chain Elongation and Medium Chain Fatty Acids Biosynthesis
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Organisms199 records
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Genome_Pathways4482 records
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Condition_Profiles200 records

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Organism Scientific NameLabelPh MinPh MaxPh OptimumTemperature Min CTemperature Max CTemperature Optimum CElectron DonorsSubstratesReactor ModesAnaerobic RequiredNotes
Organism Scientific NameSporomusa intestinalisLabelBacDive documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C30.00Temperature Max C30.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesculture-collection cultivationAnaerobic RequiredTrueNotesSource-grounded profile aggregated from exact strain-level BacDive cultivation records. Temperature and pH envelopes represent reported cultivation points, not experimentally established growth limits or optima. Media: SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c). Oxygen tolerance: anaerobe.
Organism Scientific NameSporomusa malonicaLabelBacDive documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C30.00Temperature Max C30.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesculture-collection cultivationAnaerobic RequiredTrueNotesSource-grounded profile aggregated from exact strain-level BacDive cultivation records. Temperature and pH envelopes represent reported cultivation points, not experimentally established growth limits or optima. Media: SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c). Oxygen tolerance: anaerobe.
Organism Scientific NameSporomusa paucivoransLabelBacDive documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C35.00Temperature Max C35.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesculture-collection cultivationAnaerobic RequiredTrueNotesSource-grounded profile aggregated from exact strain-level BacDive cultivation records. Temperature and pH envelopes represent reported cultivation points, not experimentally established growth limits or optima. Media: SPOROMUSA MEDIUM (BETAINE) (DSMZ Medium 311). Oxygen tolerance: anaerobe.
Organism Scientific NameSporomusa rhizaeLabelBacDive documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C35.00Temperature Max C35.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesculture-collection cultivationAnaerobic RequiredTrueNotesSource-grounded profile aggregated from exact strain-level BacDive cultivation records. Temperature and pH envelopes represent reported cultivation points, not experimentally established growth limits or optima. Media: SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c). Oxygen tolerance: anaerobe.
Organism Scientific NameSporomusa termitidaLabelBacDive documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C30.00Temperature Max C30.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesculture-collection cultivationAnaerobic RequiredTrueNotesSource-grounded profile aggregated from exact strain-level BacDive cultivation records. Temperature and pH envelopes represent reported cultivation points, not experimentally established growth limits or optima. Media: SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c). Oxygen tolerance: anaerobe.
Organism Scientific NameThermocaproicibacter melissaeLabelBacDive documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C50.00Temperature Max C50.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesculture-collection cultivationAnaerobic Required—NotesSource-grounded profile aggregated from exact strain-level BacDive cultivation records. Temperature and pH envelopes represent reported cultivation points, not experimentally established growth limits or optima. Media: RCM MEDIUM (N2/CO2) (DSMZ Medium 634c). Oxygen tolerance: not reported.
Organism Scientific NameAcetobacterium carbinolicumLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C30.00Temperature Max C30.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic RequiredTrueNotesSpecies-level proxy aggregated from 2 BacDive strain records for Acetobacterium carbinolicum. The 30–30 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: ACETOBACTERIUM MEDIUM (DSMZ Medium 135); DESULFOFARCIMEN MEDIUM (DSMZ Medium 124). Oxygen tolerance: anaerobe.
Organism Scientific NameAcetobacterium malicum subsp. dehalogenans DSM 11527LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C30.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic RequiredTrueNotesSpecies-level proxy aggregated from 2 BacDive strain records for Acetobacterium malicum. The 25–30 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: ACETOBACTERIUM DEHALOGENANS MEDIUM (DSMZ Medium 135b); ACETOBACTERIUM MEDIUM (DSMZ Medium 135). Oxygen tolerance: anaerobe.
Organism Scientific NameAcetobacterium wieringaeLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C30.00Temperature Max C30.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic RequiredTrueNotesSpecies-level proxy aggregated from 1 BacDive strain records for Acetobacterium wieringae. The 30–30 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: ACETOBACTERIUM MEDIUM (DSMZ Medium 135). Oxygen tolerance: anaerobe.
Organism Scientific NameAcetobacterium woodiiLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C30.00Temperature Max C30.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic RequiredTrueNotesSpecies-level proxy aggregated from 1 BacDive strain records for Acetobacterium woodii. The 30–30 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: ACETOBACTERIUM MEDIUM (DSMZ Medium 135). Oxygen tolerance: anaerobe.
Organism Scientific NameAcetobacterium woodii DSM 1030LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C30.00Temperature Max C30.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic RequiredTrueNotesSpecies-level proxy aggregated from 1 BacDive strain records for Acetobacterium woodii. The 30–30 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: ACETOBACTERIUM MEDIUM (DSMZ Medium 135). Oxygen tolerance: anaerobe.
Organism Scientific NameAnaerostipes caccaeLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic RequiredTrueNotesSpecies-level proxy aggregated from 2 BacDive strain records for Anaerostipes caccae. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: PYG MEDIUM (MODIFIED) (DSMZ Medium 104); MEDIUM 20 - for Anaerobic bacteria; CIP Medium 20; SCHAEDLER BROTH (ROTH; 5772) (DSMZ Medium 1669). Oxygen tolerance: anaerobe.
Organism Scientific NameAnaerostipes caccae L1-92LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic RequiredTrueNotesSpecies-level proxy aggregated from 2 BacDive strain records for Anaerostipes caccae. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: PYG MEDIUM (MODIFIED) (DSMZ Medium 104); MEDIUM 20 - for Anaerobic bacteria; CIP Medium 20; SCHAEDLER BROTH (ROTH; 5772) (DSMZ Medium 1669). Oxygen tolerance: anaerobe.
Organism Scientific NameAnaerostipes hadrusLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 2 BacDive strain records for Anaerostipes hadrus. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: YCFA-MEDIUM (MODIFIED) (DSMZ Medium 1611); FASTIDIOUS ANAEROBE AGAR (DSMZ Medium 1203); CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110). Oxygen tolerance: not reported.
Organism Scientific NameAnaerostipes hadrus ATCC 29173 = JCM 17467LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 2 BacDive strain records for Anaerostipes hadrus. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: YCFA-MEDIUM (MODIFIED) (DSMZ Medium 1611); FASTIDIOUS ANAEROBE AGAR (DSMZ Medium 1203); CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110). Oxygen tolerance: not reported.
Organism Scientific NameAnaerostipes rhamnosivoransLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 1 BacDive strain records for Anaerostipes rhamnosivorans. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: PYG MEDIUM (MODIFIED) (DSMZ Medium 104). Oxygen tolerance: not reported.
Organism Scientific NameAnaerotignum neopropionicumLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C30.00Temperature Max C30.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 1 BacDive strain records for Anaerotignum neopropionicum. The 30–30 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: ANAEROTIGNUM NEOPROPIONICUM MEDIUM (DSMZ Medium 318b). Oxygen tolerance: not reported.
Organism Scientific NameBifidobacterium longumLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 57 BacDive strain records for Bifidobacterium longum. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58); MEDIUM 20 - for Anaerobic bacteria; CIP Medium 20; WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339); CIP Medium 72. Oxygen tolerance: anaerobe; microaerophile.
Organism Scientific NameBordetella aviumLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C30.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 5 BacDive strain records for Bordetella avium. The 30–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: MEDIUM 3 - Columbia agar; CIP Medium 3; CIP Medium 21; CIP Medium 72; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); CASO AGAR (MERCK 105458) (DSMZ Medium 220); blood agar; MacConkey. Oxygen tolerance: aerobe; obligate aerobe.
Organism Scientific NameBordetella avium 197NLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C30.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 5 BacDive strain records for Bordetella avium. The 30–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: MEDIUM 3 - Columbia agar; CIP Medium 3; CIP Medium 21; CIP Medium 72; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); CASO AGAR (MERCK 105458) (DSMZ Medium 220); blood agar; MacConkey. Oxygen tolerance: aerobe; obligate aerobe.
Organism Scientific NameBordetella bronchialisLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 1 BacDive strain records for Bordetella bronchialis. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6. Oxygen tolerance: aerobe.
Organism Scientific NameBordetella bronchisepticaLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C10.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 59 BacDive strain records for Bordetella bronchiseptica. The 10–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 72; MEDIUM 72- for trypto casein soja agar; CIP Medium 21; MEDIUM 3 - Columbia agar; CIP Medium 3; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92); MEDIUM 21 - for Bordetella. Oxygen tolerance: aerobe; obligate aerobe.
Organism Scientific NameBordetella bronchiseptica 253LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C10.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 59 BacDive strain records for Bordetella bronchiseptica. The 10–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 72; MEDIUM 72- for trypto casein soja agar; CIP Medium 21; MEDIUM 3 - Columbia agar; CIP Medium 3; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92); MEDIUM 21 - for Bordetella. Oxygen tolerance: aerobe; obligate aerobe.
Organism Scientific NameBordetella bronchiseptica MO149LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C10.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 59 BacDive strain records for Bordetella bronchiseptica. The 10–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 72; MEDIUM 72- for trypto casein soja agar; CIP Medium 21; MEDIUM 3 - Columbia agar; CIP Medium 3; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92); MEDIUM 21 - for Bordetella. Oxygen tolerance: aerobe; obligate aerobe.
Organism Scientific NameBordetella bronchiseptica RB50LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C10.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 59 BacDive strain records for Bordetella bronchiseptica. The 10–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 72; MEDIUM 72- for trypto casein soja agar; CIP Medium 21; MEDIUM 3 - Columbia agar; CIP Medium 3; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92); MEDIUM 21 - for Bordetella. Oxygen tolerance: aerobe; obligate aerobe.
Organism Scientific NameBordetella hinziiLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C42.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 8 BacDive strain records for Bordetella hinzii. The 25–42 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: MEDIUM 72- for trypto casein soja agar; CIP Medium 72; CIP Medium 21; CASO AGAR (MERCK 105458) (DSMZ Medium 220); TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92); COLUMBIA BLOOD MEDIUM (DSMZ Medium 693). Oxygen tolerance: aerobe.
Organism Scientific NameBordetella holmesiiLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 10 BacDive strain records for Bordetella holmesii. The 25–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6; MEDIUM 21 - for Bordetella; CIP Medium 21; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438). Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella holmesii 44057LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 10 BacDive strain records for Bordetella holmesii. The 25–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6; MEDIUM 21 - for Bordetella; CIP Medium 21; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438). Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella holmesii ATCC 51541LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 10 BacDive strain records for Bordetella holmesii. The 25–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6; MEDIUM 21 - for Bordetella; CIP Medium 21; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438). Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella holmesii F627LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 10 BacDive strain records for Bordetella holmesii. The 25–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6; MEDIUM 21 - for Bordetella; CIP Medium 21; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438). Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella holmesii H558LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 10 BacDive strain records for Bordetella holmesii. The 25–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6; MEDIUM 21 - for Bordetella; CIP Medium 21; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438). Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella parapertussisLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 46 BacDive strain records for Bordetella parapertussis. The 25–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 21; MEDIUM 21 - for Bordetella; CIP Medium 440; MEDIUM 440 - for Bordetella; BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438); MEDIUM 72- for trypto casein soja agar; CIP Medium 72; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693). Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella parapertussis 12822LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 46 BacDive strain records for Bordetella parapertussis. The 25–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 21; MEDIUM 21 - for Bordetella; CIP Medium 440; MEDIUM 440 - for Bordetella; BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438); MEDIUM 72- for trypto casein soja agar; CIP Medium 72; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693). Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella parapertussis Bpp5LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 46 BacDive strain records for Bordetella parapertussis. The 25–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 21; MEDIUM 21 - for Bordetella; CIP Medium 440; MEDIUM 440 - for Bordetella; BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438); MEDIUM 72- for trypto casein soja agar; CIP Medium 72; COLUMBIA BLOOD MEDIUM (DSMZ Medium 693). Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella pertussisLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 100 BacDive strain records for Bordetella pertussis. The 25–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 21; MEDIUM 21 - for Bordetella; MEDIUM 440 - for Bordetella; CIP Medium 440; BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438); COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6. Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella pertussis 137LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 100 BacDive strain records for Bordetella pertussis. The 25–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 21; MEDIUM 21 - for Bordetella; MEDIUM 440 - for Bordetella; CIP Medium 440; BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438); COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6. Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella pertussis 18323LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 100 BacDive strain records for Bordetella pertussis. The 25–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 21; MEDIUM 21 - for Bordetella; MEDIUM 440 - for Bordetella; CIP Medium 440; BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438); COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6. Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella pertussis B1917LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 100 BacDive strain records for Bordetella pertussis. The 25–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 21; MEDIUM 21 - for Bordetella; MEDIUM 440 - for Bordetella; CIP Medium 440; BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438); COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6. Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella pertussis B1920LabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 100 BacDive strain records for Bordetella pertussis. The 25–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 21; MEDIUM 21 - for Bordetella; MEDIUM 440 - for Bordetella; CIP Medium 440; BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438); COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6. Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella pertussis CSLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 100 BacDive strain records for Bordetella pertussis. The 25–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 21; MEDIUM 21 - for Bordetella; MEDIUM 440 - for Bordetella; CIP Medium 440; BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438); COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6. Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella pertussis Tohama ILabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 100 BacDive strain records for Bordetella pertussis. The 25–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CIP Medium 21; MEDIUM 21 - for Bordetella; MEDIUM 440 - for Bordetella; CIP Medium 440; BORDET-GENGOU-MEDIUM (DIFCO) (DSMZ Medium 438); COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6. Oxygen tolerance: aerobe; microaerophile; obligate aerobe.
Organism Scientific NameBordetella petriiLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C25.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 1 BacDive strain records for Bordetella petrii. The 25–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535); CASO AGAR (MERCK 105458) (DSMZ Medium 220); NUTRIENT AGAR (DSMZ Medium 1); MacConkey agar; MEDIUM 6 - Columbia agar with 10 % horse blood; CIP Medium 6. Oxygen tolerance: not reported.
Organism Scientific NameBordetella pseudohinziiLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 2 BacDive strain records for Bordetella pseudohinzii. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: Bordet-Gengou agar; TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535); COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); CIP Medium 6. Oxygen tolerance: not reported.
Organism Scientific NameBordetella trematumLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C15.00Temperature Max C42.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 14 BacDive strain records for Bordetella trematum. The 15–42 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: MEDIUM 21 - for Bordetella; CIP Medium 21; TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92); CASO AGAR (MERCK 105458) (DSMZ Medium 220); blood agar; MacConkey agar. Oxygen tolerance: aerobe; obligate aerobe.
Organism Scientific NameCaproicibacter fermentansLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 1 BacDive strain records for Caproicibacter fermentans. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c). Oxygen tolerance: not reported.
Organism Scientific NameCaproiciproducens galactitolivoransLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 1 BacDive strain records for Caproiciproducens galactitolivorans. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: not reported. Oxygen tolerance: not reported.
Organism Scientific NameClostridium acetobutylicumLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C35.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic RequiredTrueNotesSpecies-level proxy aggregated from 61 BacDive strain records for Clostridium acetobutylicum. The 35–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CLOSTRIDIUM ACETOBUTYLICUM MEDIUM (DSMZ Medium 411); PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c). Oxygen tolerance: anaerobe.
Organism Scientific NameClostridium aciditoleransLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C20.00Temperature Max C45.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic Required—NotesSpecies-level proxy aggregated from 1 BacDive strain records for Clostridium aciditolerans. The 20–45 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: PY + X MEDIUM (DSMZ Medium 104b). Oxygen tolerance: not reported.
Organism Scientific NameClostridium autoethanogenumLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic RequiredTrueNotesSpecies-level proxy aggregated from 2 BacDive strain records for Clostridium autoethanogenum. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CLOSTRIDIUM LJUNGDAHLII MEDIUM (DSMZ Medium 879). Oxygen tolerance: anaerobe.
Organism Scientific NameClostridium baratiiLabelSpecies-level documented cultivation conditionsPh Min—Ph Max—Ph Optimum—Temperature Min C37.00Temperature Max C37.00Temperature Optimum C—Electron Donors—Substrates—Reactor Modesspecies-level culture recordsAnaerobic RequiredTrueNotesSpecies-level proxy aggregated from 4 BacDive strain records for Clostridium baratii. The 37–37 °C envelope contains reported positive cultivation temperatures; it is not an experimentally established range for every strain. Common media: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110); LIVER BROTH (Oxoid CM 77) (DSMZ Medium 77); COLUMBIA BLOOD MEDIUM (DSMZ Medium 693); FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a); MEDIUM 20 - for Anaerobic bacteria; CIP Medium 20. Oxygen tolerance: anaerobe.