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Marker_Predictions
8737 matching records · showing up to 50 per page
| Assembly Accession | Assembly Organism Scientific Name | Marker Code | Protein Accession | Orthogroup Accession | Method | Confidence | Curation Status | Domain Score | Score Cutoff | Domain I Evalue | Hmm Coverage | Sequence Coverage | Orthogroup Supported | Annotation Support | Product | Seqid | Start | End | Strand | Curation Reason | Evidence Title |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodeaccB | Protein AccessionBFK12787.1 | Orthogroup AccessionOG0006849 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusapproved_candidate | Domain Score155.900 | Score Cutoff67.350 | Domain I Evalue0.0000000000000000000000000000000000000000000000014 | Hmm Coverage0.98100 | Sequence Coverage0.99300 | Orthogroup Supported— | Annotation Supportgene_symbol | Productacetyl-CoA carboxylase biotin carboxyl carrier protein | SeqidAP031412.1 | Start3013774 | End3014193 | Strand- | Curation Reasonstrong profile plus independent annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodeaccC | Protein AccessionBFK12785.1 | Orthogroup AccessionOG0006865 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score724.700 | Score Cutoff373.900 | Domain I Evalue5.9e-221 | Hmm Coverage0.99300 | Sequence Coverage0.99800 | Orthogroup Supported— | Annotation Support— | Productacetyl-CoA carboxylase biotin carboxylase subunit | SeqidAP031412.1 | Start3011974 | End3013314 | Strand- | Curation Reasonretain confidence tier and orthogroup-support fields during import | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodeaccD | Protein AccessionBFK12784.1 | Orthogroup AccessionOG0000844 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score435.200 | Score Cutoff253.500 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 | Hmm Coverage0.98300 | Sequence Coverage0.50000 | Orthogroup SupportedTrue | Annotation Support— | Producthypothetical protein | SeqidAP031412.1 | Start3010254 | End3011942 | Strand- | Curation Reasonstrong profile and bridge orthogroup support | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodeadhE | Protein AccessionBFK10765.1 | Orthogroup AccessionOG0002334 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score1532.600 | Score Cutoff801.100 | Domain I Evalue— | Hmm Coverage0.99400 | Sequence Coverage0.98500 | Orthogroup SupportedTrue | Annotation Supportgene_symbol | Productbifunctional acetaldehyde-CoA/alcohol dehydrogenase | SeqidAP031412.1 | Start995312 | End997924 | Strand+ | Curation Reasonstrong profile and bridge orthogroup support; annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodefabD | Protein AccessionBFK12790.1 | Orthogroup AccessionOG0009682 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusapproved_candidate | Domain Score313.300 | Score Cutoff303.950 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 | Hmm Coverage0.96800 | Sequence Coverage0.97100 | Orthogroup Supported— | Annotation Supportgene_symbol | ProductACP S-malonyltransferase | SeqidAP031412.1 | Start3016183 | End3017115 | Strand- | Curation Reasonstrong profile plus independent annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodefabF | Protein AccessionBFK12788.1 | Orthogroup AccessionOG0006593 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusapproved_candidate | Domain Score578.700 | Score Cutoff358.250 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000085 | Hmm Coverage0.99300 | Sequence Coverage0.99500 | Orthogroup Supported— | Annotation Supportgene_symbol | Productbeta-ketoacyl-ACP synthase II | SeqidAP031412.1 | Start3014204 | End3015442 | Strand- | Curation Reasonstrong profile plus independent annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodefabG | Protein AccessionBFK11673.1 | Orthogroup AccessionOG0000242 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusneeds_review | Domain Score106.200 | Score Cutoff70.850 | Domain I Evalue0.0000000000000000000000000000000026 | Hmm Coverage0.86700 | Sequence Coverage0.82900 | Orthogroup SupportedTrue | Annotation Support— | ProductSDR family NAD(P)-dependent oxidoreductase | SeqidAP031412.1 | Start1950895 | End1951653 | Strand- | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodefabG | Protein AccessionBFK12619.1 | Orthogroup AccessionOG0001495 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score226.600 | Score Cutoff70.850 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000000000000000000045 | Hmm Coverage0.97600 | Sequence Coverage0.99600 | Orthogroup Supported— | Annotation Support— | ProductSDR family oxidoreductase | SeqidAP031412.1 | Start2815165 | End2815899 | Strand+ | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodefabG | Protein AccessionBFK12789.1 | Orthogroup AccessionOG0000008 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score273.200 | Score Cutoff70.850 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000027 | Hmm Coverage0.99200 | Sequence Coverage0.99600 | Orthogroup SupportedTrue | Annotation Supportgene_symbol | Product3-oxoacyl-[acyl-carrier-protein] reductase | SeqidAP031412.1 | Start3015461 | End3016201 | Strand- | Curation Reasonstrong profile and bridge orthogroup support; annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodefabH | Protein AccessionBFK12793.1 | Orthogroup AccessionOG0009638 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score306.200 | Score Cutoff185.750 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000038 | Hmm Coverage0.98500 | Sequence Coverage0.99000 | Orthogroup Supported— | Annotation Support— | Productketoacyl-ACP synthase III | SeqidAP031412.1 | Start3018343 | End3019266 | Strand- | Curation Reasonno bridge-supported orthogroup; require domain, motif, or neighborhood confirmation | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodefabK | Protein AccessionBFK12791.1 | Orthogroup AccessionOG0001452 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusapproved_candidate | Domain Score518.100 | Score Cutoff166.150 | Domain I Evalue0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 | Hmm Coverage0.98400 | Sequence Coverage0.98700 | Orthogroup Supported— | Annotation Supportgene_symbol | Productenoyl-[acyl-carrier-protein] reductase FabK | SeqidAP031412.1 | Start3017108 | End3018049 | Strand- | Curation Reasonstrong profile plus independent annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodefabL | Protein AccessionBFK12619.1 | Orthogroup AccessionOG0001495 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score178.000 | Score Cutoff107.850 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000037 | Hmm Coverage0.96800 | Sequence Coverage0.99200 | Orthogroup Supported— | Annotation Support— | ProductSDR family oxidoreductase | SeqidAP031412.1 | Start2815165 | End2815899 | Strand+ | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodefabL | Protein AccessionBFK12789.1 | Orthogroup AccessionOG0000008 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score219.800 | Score Cutoff107.850 | Domain I Evalue0.000000000000000000000000000000000000000000000000000000000000000000065 | Hmm Coverage0.97200 | Sequence Coverage0.98800 | Orthogroup Supported— | Annotation Support— | Product3-oxoacyl-[acyl-carrier-protein] reductase | SeqidAP031412.1 | Start3015461 | End3016201 | Strand- | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodefabZ | Protein AccessionBFK12786.1 | Orthogroup AccessionOG0000074 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score174.000 | Score Cutoff42.550 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000038 | Hmm Coverage0.76000 | Sequence Coverage0.96500 | Orthogroup SupportedTrue | Annotation Supportgene_symbol | Product3-hydroxyacyl-ACP dehydratase FabZ | SeqidAP031412.1 | Start3013323 | End3013751 | Strand- | Curation Reasonstrong profile and bridge orthogroup support; annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodernfA | Protein AccessionBFK11703.1 | Orthogroup AccessionOG0001169 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score272.400 | Score Cutoff143.600 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000048 | Hmm Coverage0.99500 | Sequence Coverage0.99000 | Orthogroup SupportedTrue | Annotation Support— | Productelectron transport complex subunit RsxA | SeqidAP031412.1 | Start1978620 | End1979195 | Strand- | Curation Reasonstrong profile and bridge orthogroup support | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodernfB | Protein AccessionBFK11702.1 | Orthogroup AccessionOG0001404 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score309.200 | Score Cutoff219.950 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005 | Hmm Coverage0.92100 | Sequence Coverage0.97700 | Orthogroup SupportedTrue | Annotation Support— | ProductRnfABCDGE type electron transport complex subunit B | SeqidAP031412.1 | Start1977815 | End1978606 | Strand- | Curation Reasonstrong profile and bridge orthogroup support | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodernfC | Protein AccessionBFK11707.1 | Orthogroup AccessionOG0001114 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score367.400 | Score Cutoff243.150 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 | Hmm Coverage0.73200 | Sequence Coverage0.70800 | Orthogroup SupportedTrue | Annotation Support— | Productelectron transport complex subunit RsxC | SeqidAP031412.1 | Start1981466 | End1982785 | Strand- | Curation Reasonstrong profile and bridge orthogroup support | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodernfD | Protein AccessionBFK11706.1 | Orthogroup AccessionOG0001182 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score332.800 | Score Cutoff267.700 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 | Hmm Coverage0.93800 | Sequence Coverage0.98100 | Orthogroup SupportedTrue | Annotation Support— | ProductRnfABCDGE type electron transport complex subunit D | SeqidAP031412.1 | Start1980509 | End1981438 | Strand- | Curation Reasonstrong profile and bridge orthogroup support | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodernfE | Protein AccessionBFK11704.1 | Orthogroup AccessionOG0001153 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score291.600 | Score Cutoff171.200 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 | Hmm Coverage0.96600 | Sequence Coverage0.86600 | Orthogroup SupportedTrue | Annotation Support— | Productelectron transport complex subunit E | SeqidAP031412.1 | Start1979210 | End1979908 | Strand- | Curation Reasonstrong profile and bridge orthogroup support | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_042854375.1 | Assembly Organism Scientific NameCoprococcus phoceensis | Marker CodernfG | Protein AccessionBFK11705.1 | Orthogroup AccessionOG0001292 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score148.800 | Score Cutoff136.050 | Domain I Evalue0.00000000000000000000000000000000000000000000022 | Hmm Coverage0.92300 | Sequence Coverage0.95000 | Orthogroup SupportedTrue | Annotation Support— | ProductRnfABCDGE type electron transport complex subunit G | SeqidAP031412.1 | Start1979901 | End1980509 | Strand- | Curation Reasonstrong profile and bridge orthogroup support | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodeaccA | Protein AccessionWP_003667767.1 | Orthogroup AccessionOG0001120 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score316.400 | Score Cutoff242.650 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 | Hmm Coverage0.95600 | Sequence Coverage0.98800 | Orthogroup SupportedTrue | Annotation Supportgene_symbol | Productacetyl-CoA carboxylase carboxyltransferase subunit alpha | SeqidNC_010609.1 | Start1047186 | End1047962 | Strand- | Curation Reasonstrong profile and bridge orthogroup support; annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodeaccB | Protein AccessionWP_003667760.1 | Orthogroup AccessionOG0004383 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusrejected | Domain Score140.800 | Score Cutoff67.350 | Domain I Evalue0.000000000000000000000000000000000000000000057 | Hmm Coverage0.99400 | Sequence Coverage0.96700 | Orthogroup Supported— | Annotation Support— | Productacetyl-CoA carboxylase biotin carboxyl carrier protein | SeqidNC_010609.1 | Start1050606 | End1051058 | Strand- | Curation Reasonredundant entry | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodeaccC | Protein AccessionWP_003667763.1 | Orthogroup AccessionOG0003273 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusapproved_candidate | Domain Score649.400 | Score Cutoff373.900 | Domain I Evalue3.9e-198 | Hmm Coverage0.99100 | Sequence Coverage0.97600 | Orthogroup Supported— | Annotation Supportgene_symbol | Productacetyl-CoA carboxylase biotin carboxylase subunit | SeqidNC_010609.1 | Start1048800 | End1050170 | Strand- | Curation Reasonstrong profile plus independent annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodeaccD | Protein AccessionWP_169471569.1 | Orthogroup AccessionOG0000844 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score370.400 | Score Cutoff253.500 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 | Hmm Coverage0.93900 | Sequence Coverage0.95700 | Orthogroup SupportedTrue | Annotation Supportgene_symbol | Productacetyl-CoA carboxylase, carboxyltransferase subunit beta | SeqidNC_010609.1 | Start1047955 | End1048803 | Strand- | Curation Reasonstrong profile and bridge orthogroup support; annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodeadhE | Protein AccessionWP_003667367.1 | Orthogroup AccessionOG0002334 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score1080.000 | Score Cutoff801.100 | Domain I Evalue— | Hmm Coverage0.99300 | Sequence Coverage0.96900 | Orthogroup SupportedTrue | Annotation Supportgene_symbol | Productbifunctional acetaldehyde-CoA/alcohol dehydrogenase | SeqidNC_010609.1 | Start365197 | End367833 | Strand- | Curation Reasonstrong profile and bridge orthogroup support; annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker Codecrt | Protein AccessionWP_003667939.1 | Orthogroup AccessionOG0000004 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score154.200 | Score Cutoff118.200 | Domain I Evalue0.0000000000000000000000000000000000000000000000062 | Hmm Coverage0.98500 | Sequence Coverage0.93800 | Orthogroup Supported— | Annotation Support— | Product1,4-dihydroxy-2-naphthoyl-CoA synthase | SeqidNC_010609.1 | Start951232 | End952053 | Strand+ | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabF | Protein AccessionWP_003667758.1 | Orthogroup AccessionOG0000297 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusapproved_candidate | Domain Score505.100 | Score Cutoff358.250 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 | Hmm Coverage0.98800 | Sequence Coverage0.99500 | Orthogroup Supported— | Annotation Supportgene_symbol | Productbeta-ketoacyl-ACP synthase II | SeqidNC_010609.1 | Start1051065 | End1052297 | Strand- | Curation Reasonstrong profile plus independent annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabG | Protein AccessionWP_003667121.1 | Orthogroup AccessionOG0005890 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score179.200 | Score Cutoff70.850 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000013 | Hmm Coverage0.96000 | Sequence Coverage0.95900 | Orthogroup Supported— | Annotation Support— | ProductSDR family NAD(P)-dependent oxidoreductase | SeqidNC_010609.1 | Start196309 | End197049 | Strand- | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabG | Protein AccessionWP_003667757.1 | Orthogroup AccessionOG0000008 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score224.400 | Score Cutoff70.850 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000022 | Hmm Coverage0.99200 | Sequence Coverage0.99600 | Orthogroup SupportedTrue | Annotation Supportgene_symbol | Product3-oxoacyl-[acyl-carrier-protein] reductase | SeqidNC_010609.1 | Start1052308 | End1053042 | Strand- | Curation Reasonstrong profile and bridge orthogroup support; annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabG | Protein AccessionWP_003669062.1 | Orthogroup AccessionOG0002106 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score188.300 | Score Cutoff70.850 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000000022 | Hmm Coverage0.99200 | Sequence Coverage0.99200 | Orthogroup Supported— | Annotation Support— | Productglucose 1-dehydrogenase | SeqidNC_010609.1 | Start1758386 | End1759141 | Strand+ | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabG | Protein AccessionWP_011953536.1 | Orthogroup AccessionOG0000008 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusneeds_review | Domain Score199.800 | Score Cutoff70.850 | Domain I Evalue0.000000000000000000000000000000000000000000000000000000000000068 | Hmm Coverage0.97200 | Sequence Coverage0.98400 | Orthogroup SupportedTrue | Annotation Support— | Product(S)-acetoin forming diacetyl reductase | SeqidNC_010609.1 | Start1550027 | End1550800 | Strand- | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabG | Protein AccessionWP_012390529.1 | Orthogroup AccessionOG0000242 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusneeds_review | Domain Score166.800 | Score Cutoff70.850 | Domain I Evalue0.00000000000000000000000000000000000000000000000000082 | Hmm Coverage0.87900 | Sequence Coverage0.78300 | Orthogroup SupportedTrue | Annotation Support— | ProductSDR family NAD(P)-dependent oxidoreductase | SeqidNC_010609.1 | Start738478 | End739311 | Strand+ | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabH | Protein AccessionWP_003667751.1 | Orthogroup AccessionOG0005504 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score285.500 | Score Cutoff185.750 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 | Hmm Coverage0.98800 | Sequence Coverage0.99100 | Orthogroup Supported— | Annotation Support— | Productbeta-ketoacyl-ACP synthase III | SeqidNC_010609.1 | Start1054238 | End1055212 | Strand- | Curation Reasonno bridge-supported orthogroup; require domain, motif, or neighborhood confirmation | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabI | Protein AccessionWP_003667768.1 | Orthogroup AccessionOG0001129 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusapproved_candidate | Domain Score346.800 | Score Cutoff193.450 | Domain I Evalue0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000095 | Hmm Coverage0.96500 | Sequence Coverage0.98400 | Orthogroup Supported— | Annotation Supportgene_symbol | Productenoyl-ACP reductase FabI | SeqidNC_010609.1 | Start1046411 | End1047175 | Strand- | Curation Reasonstrong profile plus independent annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabL | Protein AccessionWP_003667121.1 | Orthogroup AccessionOG0005890 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score149.300 | Score Cutoff107.850 | Domain I Evalue0.00000000000000000000000000000000000000000000022 | Hmm Coverage0.96800 | Sequence Coverage0.97200 | Orthogroup Supported— | Annotation Support— | ProductSDR family NAD(P)-dependent oxidoreductase | SeqidNC_010609.1 | Start196309 | End197049 | Strand- | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabL | Protein AccessionWP_003667757.1 | Orthogroup AccessionOG0000008 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score178.400 | Score Cutoff107.850 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000027 | Hmm Coverage0.97600 | Sequence Coverage0.98800 | Orthogroup Supported— | Annotation Support— | Product3-oxoacyl-[acyl-carrier-protein] reductase | SeqidNC_010609.1 | Start1052308 | End1053042 | Strand- | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabL | Protein AccessionWP_003669062.1 | Orthogroup AccessionOG0002106 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score168.700 | Score Cutoff107.850 | Domain I Evalue0.00000000000000000000000000000000000000000000000000026 | Hmm Coverage0.99200 | Sequence Coverage0.99600 | Orthogroup Supported— | Annotation Support— | Productglucose 1-dehydrogenase | SeqidNC_010609.1 | Start1758386 | End1759141 | Strand+ | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabL | Protein AccessionWP_011953536.1 | Orthogroup AccessionOG0000008 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score194.200 | Score Cutoff107.850 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000043 | Hmm Coverage0.99200 | Sequence Coverage0.99600 | Orthogroup Supported— | Annotation Support— | Product(S)-acetoin forming diacetyl reductase | SeqidNC_010609.1 | Start1550027 | End1550800 | Strand- | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabL | Protein AccessionWP_012390529.1 | Orthogroup AccessionOG0000242 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score138.300 | Score Cutoff107.850 | Domain I Evalue0.00000000000000000000000000000000000000000048 | Hmm Coverage0.88900 | Sequence Coverage0.79400 | Orthogroup Supported— | Annotation Support— | ProductSDR family NAD(P)-dependent oxidoreductase | SeqidNC_010609.1 | Start738478 | End739311 | Strand+ | Curation Reasonextreme per-proteome copy number; profile alone is not function-specific | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabZ | Protein AccessionWP_003667749.1 | Orthogroup AccessionOG0000074 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score127.400 | Score Cutoff42.550 | Domain I Evalue0.00000000000000000000000000000000000000074 | Hmm Coverage0.76000 | Sequence Coverage0.92600 | Orthogroup SupportedTrue | Annotation Supportgene_symbol | Product3-hydroxyacyl-ACP dehydratase FabZ | SeqidNC_010609.1 | Start1055765 | End1056211 | Strand- | Curation Reasonstrong profile and bridge orthogroup support; annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker CodefabZ | Protein AccessionWP_003667761.1 | Orthogroup AccessionOG0000074 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score166.400 | Score Cutoff42.550 | Domain I Evalue0.00000000000000000000000000000000000000000000000000085 | Hmm Coverage0.76000 | Sequence Coverage0.95100 | Orthogroup SupportedTrue | Annotation Supportgene_symbol | Product3-hydroxyacyl-ACP dehydratase FabZ | SeqidNC_010609.1 | Start1050179 | End1050613 | Strand- | Curation Reasonstrong profile and bridge orthogroup support; annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker Codeldh | Protein AccessionWP_003665815.1 | Orthogroup AccessionOG0001545 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score391.100 | Score Cutoff183.450 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 | Hmm Coverage0.98700 | Sequence Coverage0.97200 | Orthogroup Supported— | Annotation Support— | ProductL-lactate dehydrogenase | SeqidNC_010609.1 | Start794455 | End795414 | Strand- | Curation Reasonretain confidence tier and orthogroup-support fields during import | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker Codeldh | Protein AccessionWP_003667903.1 | Orthogroup AccessionOG0001545 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score373.200 | Score Cutoff183.450 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 | Hmm Coverage0.97500 | Sequence Coverage0.94400 | Orthogroup Supported— | Annotation Support— | ProductL-lactate dehydrogenase | SeqidNC_010609.1 | Start971140 | End972114 | Strand+ | Curation Reasonretain confidence tier and orthogroup-support fields during import | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker Codeldh | Protein AccessionWP_003668523.1 | Orthogroup AccessionOG0001545 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score331.600 | Score Cutoff183.450 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 | Hmm Coverage0.98100 | Sequence Coverage0.98100 | Orthogroup Supported— | Annotation Support— | ProductL-lactate dehydrogenase | SeqidNC_010609.1 | Start1362324 | End1363262 | Strand+ | Curation Reasonretain confidence tier and orthogroup-support fields during import | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker Codeldh | Protein AccessionWP_003669420.1 | Orthogroup AccessionOG0000777 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score224.300 | Score Cutoff183.450 | Domain I Evalue0.0000000000000000000000000000000000000000000000000000000000000000000033 | Hmm Coverage0.97500 | Sequence Coverage0.95900 | Orthogroup Supported— | Annotation Support— | ProductL-lactate dehydrogenase | SeqidNC_010609.1 | Start2001585 | End2002535 | Strand- | Curation Reasonretain confidence tier and orthogroup-support fields during import | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker Codeldh | Protein AccessionWP_011953379.1 | Orthogroup AccessionOG0000777 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusneeds_review | Domain Score257.200 | Score Cutoff183.450 | Domain I Evalue0.00000000000000000000000000000000000000000000000000000000000000000000000000000033 | Hmm Coverage0.96800 | Sequence Coverage0.97100 | Orthogroup Supported— | Annotation Support— | ProductL-lactate dehydrogenase | SeqidNC_010609.1 | Start226982 | End227914 | Strand+ | Curation Reasonretain confidence tier and orthogroup-support fields during import | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010005.1 | Assembly Organism Scientific NameLimosilactobacillus reuteri subsp. reuteri JCM 1112 | Marker Codethl | Protein AccessionWP_003669568.1 | Orthogroup AccessionOG0000010 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score521.400 | Score Cutoff281.200 | Domain I Evalue0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 | Hmm Coverage0.99700 | Sequence Coverage0.99700 | Orthogroup SupportedTrue | Annotation Support— | Productacetyl-CoA C-acetyltransferase | SeqidNC_010609.1 | Start64655 | End65833 | Strand+ | Curation Reasonstrong profile and bridge orthogroup support | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010145.1 | Assembly Organism Scientific NameLimosilactobacillus fermentum IFO 3956 | Marker CodeaccA | Protein AccessionWP_012390849.1 | Orthogroup AccessionOG0001120 | Methodcalibrated_profile_hmm | Confidencehigh | Curation Statusapproved_candidate | Domain Score299.400 | Score Cutoff242.650 | Domain I Evalue0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 | Hmm Coverage0.95200 | Sequence Coverage0.98800 | Orthogroup SupportedTrue | Annotation Supportgene_symbol | Productacetyl-CoA carboxylase carboxyltransferase subunit alpha | SeqidNC_010610.1 | Start387083 | End387856 | Strand+ | Curation Reasonstrong profile and bridge orthogroup support; annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010145.1 | Assembly Organism Scientific NameLimosilactobacillus fermentum IFO 3956 | Marker CodeaccB | Protein AccessionWP_003682549.1 | Orthogroup AccessionOG0004383 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusapproved_candidate | Domain Score122.100 | Score Cutoff67.350 | Domain I Evalue0.000000000000000000000000000000000000034 | Hmm Coverage0.99400 | Sequence Coverage0.99300 | Orthogroup Supported— | Annotation Supportgene_symbol | Productacetyl-CoA carboxylase biotin carboxyl carrier protein | SeqidNC_010610.1 | Start383972 | End384418 | Strand+ | Curation Reasonstrong profile plus independent annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
| Assembly AccessionGCA_000010145.1 | Assembly Organism Scientific NameLimosilactobacillus fermentum IFO 3956 | Marker CodeaccC | Protein AccessionWP_004563306.1 | Orthogroup AccessionOG0003273 | Methodcalibrated_profile_hmm | Confidencemedium | Curation Statusapproved_candidate | Domain Score650.300 | Score Cutoff373.900 | Domain I Evalue2.1e-198 | Hmm Coverage0.99300 | Sequence Coverage0.95900 | Orthogroup Supported— | Annotation Supportgene_symbol | Productacetyl-CoA carboxylase biotin carboxylase subunit | SeqidNC_010610.1 | Start384876 | End386273 | Strand+ | Curation Reasonstrong profile plus independent annotation support: gene_symbol | Evidence TitleCross-genus MCFA calibrated HMM validation 2026-07-26 |
INTERACTIVE DATASET
The chart summarizes the most frequent values in the filtered records.