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Scientific Name Rank Taxonomy Id Strain Role Substrates Products Notes

199 matching records · showing up to 50 per page

Scientific Name	Rank	Taxonomy Id	Strain	Role	Substrates	Products	Notes
Scientific NameClostridium kluyveri	Rankspecies	Taxonomy Id583	StrainDSM 555	Rolevalidated	Substratesethanol, acetate	Productsbutyrate, caproate	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameMegasphaera elsdenii	Rankspecies	Taxonomy Id907	StrainDSM 20460	Rolevalidated	Substrateslactate, glucose, acetate	Productsbutyrate, valerate, caproate	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameMegasphaera hexanoica	Rankspecies	Taxonomy Id1675036	StrainMH	Rolevalidated	Substrateslactate, acetate	Productsbutyrate, caproate	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameCaproicibacterium lactatifermentans	Rankspecies	Taxonomy Id2666138	StrainLBM19010 / JCM 33782	Rolevalidated	Substrateslactate, glucose	Productsbutyrate, caproate	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameCaproiciproducens galactitolivorans	Rankspecies	Taxonomy Id—	Strain—	Rolevalidated	Substratesgalactitol, glucose	Productsbutyrate, caproate	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameEubacterium pyruvativorans	Rankspecies	Taxonomy Id—	Strain—	Rolevalidated	Substratespyruvate	Productsacetate, butyrate, caproate	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameClostridium luticellarii	Rankspecies	Taxonomy Id—	Strain—	Rolereported	Substrateslactate	Productsbutyrate, caproate	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameClostridium carboxidivorans	Rankspecies	Taxonomy Id—	Strain—	Rolevalidated	SubstratesCO, CO2, H2	Productsacetate, ethanol, butyrate, butanol, caproate, hexanol	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameEubacterium limosum	Rankspecies	Taxonomy Id—	Strain—	Rolevalidated	SubstratesCO, CO2, H2, methanol	Productsacetate, butyrate, caproate	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameMegasphaera cerevisiae	Rankspecies	Taxonomy Id—	Strain—	Rolevalidated	Substratescarbohydrates	Productsshort- and medium-chain carboxylates	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameRhodospirillum rubrum	Rankspecies	Taxonomy Id—	Strain—	Rolevalidated	Substratesorganic acids, light	Productscaproate under reported conditions	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameClostridium	Rankgenus	Taxonomy Id—	Strain—	Rolecommunity	Substratesvarious	Productsvarious	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameMegasphaera	Rankgenus	Taxonomy Id—	Strain—	Rolecommunity	Substrateslactate, sugars	ProductsSCFAs, MCFAs	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameEubacterium	Rankgenus	Taxonomy Id—	Strain—	Rolecommunity	Substratesvarious	Productsvarious	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameRuminococcaceae	Rankfamily	Taxonomy Id—	Strain—	Rolecommunity	Substratescomplex carbohydrates	Productsfermentation products	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NamePseudoclavibacter	Rankgenus	Taxonomy Id—	Strain—	Rolecommunity	Substratesunknown	Productsunknown	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameDesulfitobacterium	Rankgenus	Taxonomy Id—	Strain—	Rolecommunity	Substratesvarious	Productsvarious	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameClostridium autoethanogenum	Rankspecies	Taxonomy Id—	Strain—	Rolecommunity	SubstratesCO, CO2, H2	Productsacetate, ethanol	NotesRole labels distinguish demonstrated caproate production from community association; validate at strain level before causal interpretation.
Scientific NameClostridium acetobutylicum	Rankspecies	Taxonomy Id—	StrainATCC 824	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium novyi	Rankspecies	Taxonomy Id—	StrainNT	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium beijerinckii	Rankspecies	Taxonomy Id—	StrainNCIMB 8052	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium botulinum	Rankspecies	Taxonomy Id—	StrainATCC 19397	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium ljungdahlii	Rankspecies	Taxonomy Id—	StrainDSM 13528	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium cellulovorans	Rankspecies	Taxonomy Id—	Strain743B	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium pasteurianum	Rankspecies	Taxonomy Id—	StrainBC1	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium bornimense	Rankspecies	Taxonomy Id—	Straintype strain: M2/40	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium baratii	Rankspecies	Taxonomy Id—	StrainSullivan	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium perfringens	Rankspecies	Taxonomy Id—	StrainFORC_003	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium butyricum	Rankspecies	Taxonomy Id—	StrainKNU-L09	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium estertheticum	Rankspecies	Taxonomy Id—	StrainDSM 8809	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium felsineum	Rankspecies	Taxonomy Id—	StrainDSM 6424	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium argentinense	Rankspecies	Taxonomy Id—	Strain89G	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium isatidis	Rankspecies	Taxonomy Id—	StrainDSM 15098	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium chauvoei	Rankspecies	Taxonomy Id—	StrainDSM 7528	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium drakei	Rankspecies	Taxonomy Id—	StrainSL1	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium fermenticellae	Rankspecies	Taxonomy Id—	StrainJN500901	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium manihotivorum	Rankspecies	Taxonomy Id—	StrainCT4	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium diolis	Rankspecies	Taxonomy Id—	StrainDSM 15410	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific Name[Clostridium] innocuum	Rankspecies	Taxonomy Id—	StrainLC-LUMC-CI-001	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium intestinale	Rankspecies	Taxonomy Id—	StrainLx1	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium gasigenes	Rankspecies	Taxonomy Id—	StrainCGAS001	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium gelidum	Rankspecies	Taxonomy Id—	StrainC5S11	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium cadaveris	Rankspecies	Taxonomy Id—	StrainIFB3C5	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium caseinilyticum	Rankspecies	Taxonomy Id—	StrainFAM 27665	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium cochlearium	Rankspecies	Taxonomy Id—	StrainB	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium nitrophenolicum	Rankspecies	Taxonomy Id—	StrainJCM 14030	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium budayi	Rankspecies	Taxonomy Id—	StrainJCM 9989	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium aciditolerans	Rankspecies	Taxonomy Id—	StrainDSM 17425	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium neonatale	Rankspecies	Taxonomy Id—	Strain—	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.
Scientific NameClostridium tetani	Rankspecies	Taxonomy Id—	StrainMassachusetts substr. E88	Rolereported	Substrates—	Products—	NotesImported from the NCBI assembly data report; MCFA production is not implied.