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FUNCTIONAL ORTHOLOGY EXPLORER
Explore MCFA genes and pathway modules
Interactively inspect annotation-supported markers, orthogroups, and pathway-rule coverage across curated genomes. Genomic presence is not evidence of expression or demonstrated MCFA production.
Filter markers
Focus on a named enzyme marker or MCFA pathway module.
Compare patterns
Expand the heatmap to compare marker copy-number patterns.
Trace evidence
Distinguish annotations, reviewed candidates, and pathway assessments.
50 genomes currently visible
Marker copy-number heatmap for filtered organisms
Organism names are shown first; assembly accessions remain available as secondary identifiers. The preview is limited to the first 100 matching genomes.
| Organism and assembly | Detected markers | Pathway assessments |
|---|---|---|
Clostridium perfringensGCA_052262175.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052262265.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052262955.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052263065.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052263755.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052263885.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052264445.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052264535.1Complete Genome | thlhbdcrt×2adhEldhrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052265185.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052265295.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052265905.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052265995.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052266585.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052266735.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267185.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267195.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267205.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267215.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267225.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267235.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267245.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267255.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267265.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267275.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267285.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267295.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267305.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267315.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267325.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267335.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267345.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267355.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267365.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267375.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267425.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267575.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052267945.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052268035.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052268665.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052268835.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052269385.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052269555.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052270085.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052270135.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052270145.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | rnfcomplex 0/6reversebetaoxidationcore 3/4bcdetfmodule 0/3lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052270155.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052270165.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052270175.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052270185.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052270195.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
No genomes match the current filters.
Marker-linked orthogroups and proteins
Enter a marker gene to narrow the orthogroup menu. Select an orthogroup to inspect its complete imported protein records.
Interpretation
Absence may reflect incomplete assemblies or annotations. Orthogroup membership is supporting evidence only; unannotated orthologues are not automatically promoted to confirmed enzyme calls. Pathway completeness is marker-rule completeness and is not a flux or thermodynamic prediction.