Find genomes
Search by organism or versioned assembly accession and open its evidence record.
FUNCTIONAL ORTHOLOGY EXPLORER
Explore MCFA genes and pathway modules
Interactively inspect annotation-supported markers, orthogroups, and pathway-rule coverage across curated genomes. Genomic presence is not evidence of expression or demonstrated MCFA production.
Filter markers
Focus on a named enzyme marker or MCFA pathway module.
Compare patterns
Expand the heatmap to compare marker copy-number patterns.
Trace evidence
Distinguish annotations, reviewed candidates, and pathway assessments.
50 genomes currently visible
Marker copy-number heatmap for filtered organisms
Organism names are shown first; assembly accessions remain available as secondary identifiers. The preview is limited to the first 100 matching genomes.
| Organism and assembly | Detected markers | Pathway assessments |
|---|---|---|
Clostridium perfringensGCA_037522075.1Complete Genome | thlhbdcrt×2adhEldhrnfAaccBaccCfabGfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 4/8 |
Clostridium perfringensGCA_037522945.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_037523885.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_037524795.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_040499215.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_041930555.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_046058955.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_047150035.1Complete Genome | thlhbdcrt×2ldhlctPrnfBaccC | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 1/8 |
Clostridium perfringensGCA_047150065.1Complete Genome | thlhbdcrt×2ldhlctPrnfBaccC | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 1/8 |
Clostridium perfringensGCA_047150115.1Complete Genome | thlhbdcrt×2ldhlctPrnfBaccC | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 1/8 |
Clostridium perfringensGCA_047150185.1Complete Genome | thlhbdcrt×2ldhlctPrnfBaccC | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 1/8 |
Clostridium perfringensGCA_047150235.1Complete Genome | thlhbdcrt×2ldhlctPrnfBaccC | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 1/8 |
Clostridium perfringensGCA_047824775.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_048568325.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_048568335.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_048568345.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_048572755.1Complete Genome | thlhbdcrtadhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_050916635.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_050916645.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_051048215.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_051057975.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052056475.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052056755.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249795.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249805.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249815.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249825.1Complete Genome | thlhbdcrt×2adhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249835.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249845.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249855.1Complete Genome | thlhbdcrt×2adhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249865.1Complete Genome | thlhbdcrt×2adhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249875.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249885.1Complete Genome | thlhbdcrt×2adhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249895.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249905.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249915.1Complete Genome | thlhbdcrt×2adhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249925.1Complete Genome | thlhbdcrt×2adhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249935.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249945.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249955.1Complete Genome | thlhbdcrt×2adhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249965.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249975.1Complete Genome | thlhbdcrt×2adhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249985.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052249995.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052250005.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052250015.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052250025.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052250035.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052250045.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_052250055.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
No genomes match the current filters.
Marker-linked orthogroups and proteins
Enter a marker gene to narrow the orthogroup menu. Select an orthogroup to inspect its complete imported protein records.
Interpretation
Absence may reflect incomplete assemblies or annotations. Orthogroup membership is supporting evidence only; unannotated orthologues are not automatically promoted to confirmed enzyme calls. Pathway completeness is marker-rule completeness and is not a flux or thermodynamic prediction.