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FUNCTIONAL ORTHOLOGY EXPLORER
Explore MCFA genes and pathway modules
Interactively inspect annotation-supported markers, orthogroups, and pathway-rule coverage across curated genomes. Genomic presence is not evidence of expression or demonstrated MCFA production.
Filter markers
Focus on a named enzyme marker or MCFA pathway module.
Compare patterns
Expand the heatmap to compare marker copy-number patterns.
Trace evidence
Distinguish annotations, reviewed candidates, and pathway assessments.
50 genomes currently visible
Marker copy-number heatmap for filtered organisms
Organism names are shown first; assembly accessions remain available as secondary identifiers. The preview is limited to the first 100 matching genomes.
| Organism and assembly | Detected markers | Pathway assessments |
|---|---|---|
Clostridium perfringensGCA_003203455.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCaccDfabG | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 4/8 |
Clostridium perfringensGCA_003350945.1Complete Genome | thlhbdcrt×2adhEldhlctPaccAaccBaccCaccDfabHfabG | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 6/8 |
Clostridium perfringensGCA_016026675.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_016026995.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabGfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 4/8 |
Clostridium perfringensGCA_016027155.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_016027375.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_018135545.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138335.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138355.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabGfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 4/8 |
Clostridium perfringensGCA_020138375.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138395.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138415.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138435.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138455.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138475.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138495.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138515.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138535.1Complete Genome | thlhbdcrtadhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138555.1Complete Genome | thlhbdcrtadhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138575.1Complete Genome | thlhbdcrtadhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138595.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138615.1Complete Genome | thlhbdcrtadhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138635.1Complete Genome | thlhbdcrtadhEldhlctPaccBaccCfabGfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 4/8 |
Clostridium perfringensGCA_020138655.1Complete Genome | thlhbdcrtadhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138675.1Complete Genome | thlhbdcrtadhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138695.1Complete Genome | thlhbdcrtadhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138715.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138735.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138755.1Complete Genome | thlhbdcrtadhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138775.1Complete Genome | thlhbdcrt×2adhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020138795.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020139215.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020139235.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020139255.1Complete Genome | thlhbdcrt×2adhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020139275.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020139295.1Complete Genome | thlhbdcrtadhEldhaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_020819895.2Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_024599915.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_024599935.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_024599955.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_024652845.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_025643655.1Complete Genome | crt | reversebetaoxidationcore 1/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 0/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 0/8 |
Clostridium perfringensGCA_025643675.1Complete Genome | crt×2 | reversebetaoxidationcore 1/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 0/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 0/8 |
Clostridium perfringensGCA_025677705.1Complete Genome | thlhbdcrtadhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_025946785.1Complete Genome | thlhbdcrt×2adhEldhlctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_025989775.1Complete Genome | thlhbdcrt×2ldhlctPrnfBaccC | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 1/8 |
Clostridium perfringensGCA_026072755.1Complete Genome | thlhbdcrt×2ldhrnfBaccC | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 1/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 1/8 |
Clostridium perfringensGCA_028472985.1Complete Genome | thlhbdcrt×2adhEldhaccBfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 2/8 |
Clostridium perfringensGCA_028867175.1Complete Genome | thlhbdcrt×2adhEldhlctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium perfringensGCA_029392915.1Complete Genome | thlhbdcrt×2ldhlctPaccBaccC | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
No genomes match the current filters.
Marker-linked orthogroups and proteins
Enter a marker gene to narrow the orthogroup menu. Select an orthogroup to inspect its complete imported protein records.
Interpretation
Absence may reflect incomplete assemblies or annotations. Orthogroup membership is supporting evidence only; unannotated orthologues are not automatically promoted to confirmed enzyme calls. Pathway completeness is marker-rule completeness and is not a flux or thermodynamic prediction.