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FUNCTIONAL ORTHOLOGY EXPLORER
Explore MCFA genes and pathway modules
Interactively inspect annotation-supported markers, orthogroups, and pathway-rule coverage across curated genomes. Genomic presence is not evidence of expression or demonstrated MCFA production.
Filter markers
Focus on a named enzyme marker or MCFA pathway module.
Compare patterns
Expand the heatmap to compare marker copy-number patterns.
Trace evidence
Distinguish annotations, reviewed candidates, and pathway assessments.
50 genomes currently visible
Marker copy-number heatmap for filtered organisms
Organism names are shown first; assembly accessions remain available as secondary identifiers. The preview is limited to the first 100 matching genomes.
| Organism and assembly | Detected markers | Pathway assessments |
|---|---|---|
Caproicibacterium sp. XB1GCA_046523925.1Complete Genome | accAHMMaccBHMMaccCHMMaccDHMMcrtHMMfabFHMMfabGHMMfabKHMMrnfBHMMrnfCHMMrnfDHMMrnfEHMM | reversebetaoxidationcore 1/4bcdetfmodule 0/3rnfcomplex 4/6lactateentrysupport 0/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 5/8 |
Caproicibacterium sp. XB2GCA_044880635.1Complete Genome | accAHMMaccBHMMaccCHMMaccDHMMcrtHMMetfAHMMetfBHMMfabFHMMfabGHMMfabKHMMfabZHMMlctPHMMrnfAHMMrnfBHMMrnfCHMMrnfDHMMrnfEHMMbcdHMM | reversebetaoxidationcore 2/4bcdetfmodule 3/3rnfcomplex 5/6lactateentrysupport 1/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 6/8 |
Caproiciproducens lactatisolvensGCA_052443335.1Complete Genome | accAHMMaccBHMMaccCHMMaccDHMMcrtHMMetfAHMMetfBHMMfabFHMMfabGHMMfabKHMMfabZHMMlctPHMMldhHMMrnfAHMMrnfBHMMrnfCHMMrnfDHMMrnfEHMMrnfGHMMbcdHMM | reversebetaoxidationcore 2/4bcdetfmodule 3/3rnfcomplex 6/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 6/8 |
Caproiciproducens puteilutiGCA_052442865.1Complete Genome | accBHMMaccCHMMaccDHMMcrtHMMetfAHMM×3etfBHMM×3fabFHMMfabGHMMfabKHMMfabZHMMhbdHMM×2lctPHMMldhHMMrnfAHMMrnfBHMMrnfCHMMrnfDHMMrnfEHMMrnfGHMMthlHMMbcdHMM×3 | reversebetaoxidationcore 4/4bcdetfmodule 3/3rnfcomplex 6/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 5/8 |
Caproiciproducens sp. CPB-2GCA_036287215.1Complete Genome | accAHMMaccBHMMaccCHMMaccDHMMcrtHMMetfAHMMetfBHMMfabFHMMfabGHMMfabKHMMfabZHMMlctPHMMldhHMMrnfAHMMrnfBHMMrnfCHMMrnfDHMMrnfEHMMrnfGHMMbcdHMM | reversebetaoxidationcore 2/4bcdetfmodule 3/3rnfcomplex 6/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 6/8 |
Caproiciproducens sp. LBM24188GCA_054130445.1Complete Genome | accAHMMaccBHMM×2accCHMMaccDHMMcrtHMMfabFHMMfabGHMMfabZHMMldhHMM | reversebetaoxidationcore 1/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 6/8 |
Caproiciproducens sp. NJN-50GCA_004103755.1Complete Genome | accAHMMaccBHMMaccCHMMaccDHMMbcdHMM×2crtHMM×3etfAHMM×2etfBHMM×2fabFHMMfabGHMMfabZHMMhbdHMMlctPHMM×2rnfAHMMrnfBHMMrnfCHMMrnfDHMMrnfEHMMrnfGHMMthlHMM | reversebetaoxidationcore 4/4bcdetfmodule 3/3rnfcomplex 6/6lactateentrysupport 1/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 6/8 |
Clostridium acetobutylicumGCA_000008765.1Complete Genome | thlcrt×3bcdcoat×2ldhaccAaccDfabG | reversebetaoxidationcore 3/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 3/8 |
Clostridium acetobutylicumGCA_000191905.1Complete Genome | thl×2hbdcrt×3bcdcoat×2ldhaccAaccDfabG | reversebetaoxidationcore 4/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 3/8 |
Clostridium acetobutylicumGCA_000218855.1Complete Genome | thl×2hbdcrt×3bcdcoat×2adhE×2ldhaccDfabHfabG | reversebetaoxidationcore 4/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium aciditoleransGCA_056033985.1Complete Genome | thl×2hbd×2crt×2adhE×2ldhlctPrnfAaccBaccCfabZ×2 | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium argentinenseGCA_002074155.1Complete Genome | thlhbdcrt×2adhEldhrnfAaccB×2accC | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 2/8 |
Clostridium autoethanogenumGCA_000484505.2Complete Genome | thladhE×2lctPaccB×2accCfabZ | reversebetaoxidationcore 1/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium autoethanogenumGCA_001484725.1Complete Genome | thlhbd×2bcd×2etfA×2adhE×2rnfCaccAaccD | reversebetaoxidationcore 3/4bcdetfmodule 2/3rnfcomplex 1/6lactateentrysupport 0/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 2/8 |
Clostridium autoethanogenumGCA_040166795.1Complete Genome | thladhE×2lctPaccB×2accCfabZ | reversebetaoxidationcore 1/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium baratiiGCA_000789395.1Complete Genome | thlcrtldh×2lctPaccAaccD | reversebetaoxidationcore 2/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium baratiiGCA_001991075.2Complete Genome | thlhbdcrtldh×2lctPaccBaccCfabZ×2 | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 3/8 |
Clostridium baratiiGCA_037058205.1Complete Genome | thlhbdcrtldh×2lctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 3/8 |
Clostridium baratiiGCA_037059035.1Complete Genome | thlhbdcrtldh×2lctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 3/8 |
Clostridium baratiiGCA_037064645.1Complete Genome | thlhbdcrtldh×2lctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 3/8 |
Clostridium baratiiGCA_037066025.1Complete Genome | thlhbdcrtldh×2lctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 3/8 |
Clostridium baratiiGCA_037068065.1Complete Genome | thlhbdcrtldh×2lctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 3/8 |
Clostridium baratiiGCA_037069705.1Complete Genome | thlhbdcrtldh×2lctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 3/8 |
Clostridium baratiiGCA_042851575.1Complete Genome | thlhbdcrtldh×2lctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 3/8 |
Clostridium baratiiGCA_055383455.1Complete Genome | thlhbdcrtldh×2lctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 3/8 |
Clostridium beijerinckiiGCA_000016965.1Complete Genome | thl×2hbdcrt×5ldh×4accAaccD | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium beijerinckiiGCA_000506785.4Complete Genome | thl×2hbdcrt×6etfBadhEldh×4lctPrnfCaccCfabG | reversebetaoxidationcore 3/4bcdetfmodule 1/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 2/8 |
Clostridium beijerinckiiGCA_000767745.1Complete Genome | thl×2hbdcrt×3adhEldh×4accD | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 1/8 |
Clostridium beijerinckiiGCA_000833105.2Complete Genome | thl×2hbd×2crt×7adhEldh×3lctPaccAaccB×2accC×2accD | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 4/8 |
Clostridium beijerinckiiGCA_002003345.1Complete Genome | thl×2hbd×2crt×5ldh×5 | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 1/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 0/8 |
Clostridium beijerinckiiGCA_003129525.1Complete Genome | hbd×2crt×2ldh×2lctPaccAaccBaccCaccD | reversebetaoxidationcore 2/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 4/8 |
Clostridium beijerinckiiGCA_018140595.1Complete Genome | thl×2hbdcrt×5adhEldh×4lctPaccBaccC×2fabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium beijerinckiiGCA_018223745.1Complete Genome | thl×2hbdcrt×3adhEldh×4lctPaccBaccC×2fabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium beijerinckiiGCA_025962575.1Complete Genome | thl×2hbdcrt×2adhEldh×4lctPaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium beijerinckiiGCA_036699995.1Complete Genome | thl×2hbdcrtadhEldh×4lctPaccBaccC×2fabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium beijerinckiiGCA_052657285.1Complete Genome | thl×2hbdcrtadhEldh×3lctPrnfAaccBaccCfabZ | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 1/6lactateentrysupport 2/2ethanolentrysupport 1/1fattyacidbiosynthesiscore 3/8 |
Clostridium beijerinckiiGCA_900010805.1Complete Genome | thlhbdcrtldh×4lctPaccAaccD | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium bornimenseGCA_000577895.1Complete Genome | thlhbdldhlctP | reversebetaoxidationcore 2/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 0/8 |
Clostridium botulinumGCA_000017025.1Complete Genome | hbdbcdldhlctPaccAaccD | reversebetaoxidationcore 2/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium botulinumGCA_000017045.1Complete Genome | hbdbcdldhlctPaccAaccD | reversebetaoxidationcore 2/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium botulinumGCA_000017065.1Complete Genome | hbdbcdldhlctPaccAaccD | reversebetaoxidationcore 2/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium botulinumGCA_000019305.1Complete Genome | hbdbcdldhlctPaccAaccD | reversebetaoxidationcore 2/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium botulinumGCA_000019545.1Complete Genome | hbdbcdldhlctPaccAaccD | reversebetaoxidationcore 2/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium botulinumGCA_000020165.1Complete Genome | thlhbdbcdldh×2lctPaccAaccD | reversebetaoxidationcore 3/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium botulinumGCA_000020285.1Complete Genome | thlhbd×2bcdldh×2lctP×3accAaccD | reversebetaoxidationcore 3/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium botulinumGCA_000020345.1Complete Genome | hbdbcdldhlctPaccAaccD | reversebetaoxidationcore 2/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium botulinumGCA_000022765.1Complete Genome | hbdbcdldhlctPaccAaccD | reversebetaoxidationcore 2/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium botulinumGCA_000063585.1Complete Genome | thlhbdbcdcoat×2ldhlctP | reversebetaoxidationcore 3/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 0/8 |
Clostridium botulinumGCA_000092345.1Complete Genome | hbdbcdldhlctPaccAaccD | reversebetaoxidationcore 2/4bcdetfmodule 1/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
Clostridium botulinumGCA_000204565.1Complete Genome | thl×3hbd×2crt×2ldh×2lctPaccAaccD | reversebetaoxidationcore 3/4bcdetfmodule 0/3rnfcomplex 0/6lactateentrysupport 2/2ethanolentrysupport 0/1fattyacidbiosynthesiscore 2/8 |
No genomes match the current filters.
Marker-linked orthogroups and proteins
Enter a marker gene to narrow the orthogroup menu. Select an orthogroup to inspect its complete imported protein records.
Interpretation
Absence may reflect incomplete assemblies or annotations. Orthogroup membership is supporting evidence only; unannotated orthologues are not automatically promoted to confirmed enzyme calls. Pathway completeness is marker-rule completeness and is not a flux or thermodynamic prediction.